RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
SNRPD3-201ENST00000215829 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
SNRPD3-201ENST00000215829 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
SNRPD3-201ENST00000215829 ESDP10768 282 aa11.3□□□□□ -0.6
SNRPD3-201ENST00000215829 DAD1P61803 113 aa11.3□□□□□ -0.6
SNRPD3-201ENST00000215829 FHL2Q14192 279 aa11.29□□□□□ -0.6
SNRPD3-201ENST00000215829 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
SNRPD3-201ENST00000215829 ST20Q9HBF5 79 aa11.29□□□□□ -0.6
SNRPD3-201ENST00000215829 TRGV4A0A0C4DH28 118 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 P0DMU3 169 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 HIST3H2BBQ8N257 126 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 ZMAT4Q9H898 229 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 FA2HQ7L5A8 372 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 Q8N8P6 123 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
SNRPD3-201ENST00000215829 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 TRBV6-4A0A1B0GX49 114 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 PMCHP20382 165 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 POLR2KP53803 58 aaKnown RBP11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 RPL32P62910 135 aaKnown RBP11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 PDZD11Q5EBL8 140 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 DNAJC30Q96LL9 226 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 AP5S1Q9NUS5 200 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 Q9UF83 564 aa11.27□□□□□ -0.61
SNRPD3-201ENST00000215829 TRBV10-1A0A0K0K1A3 114 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 K7EQD1 137 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 NEXN-AS1Q8NBZ9 246 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 TNFRSF18Q9Y5U5 241 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 HSBP1O75506 76 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 HHLA3Q9XRX5 114 aa11.26□□□□□ -0.61
SNRPD3-201ENST00000215829 VCYO14598 125 aa11.25□□□□□ -0.61
SNRPD3-201ENST00000215829 ATP5G1P05496 136 aa11.25□□□□□ -0.61
SNRPD3-201ENST00000215829 S100A2P29034 98 aa11.25□□□□□ -0.61
SNRPD3-201ENST00000215829 DEFA6Q01524 100 aa11.25□□□□□ -0.61
SNRPD3-201ENST00000215829 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
SNRPD3-201ENST00000215829 TRBV27A0A0K0K1C4 114 aa11.24□□□□□ -0.61
SNRPD3-201ENST00000215829 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
SNRPD3-201ENST00000215829 TENM3Q9P273 2699 aa11.24□□□□□ -0.61
SNRPD3-201ENST00000215829 LOC105371267A0A1B0GV96 52 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 RHOHQ15669 191 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 TRBV7-3A0A075B6L6 115 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 TCAPO15273 167 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 FAM19A2Q8N3H0 131 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
SNRPD3-201ENST00000215829 HUWE1Q7Z6Z7 4374 aaKnown RBP11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 K7EMI3 77 aa11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 AMTP48728 403 aa11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 CRYBA4P53673 196 aa11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 RPL36AP83881 106 aaKnown RBP11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 RPL36ALQ969Q0 106 aaKnown RBP11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
SNRPD3-201ENST00000215829 IGHV1-24A0A0C4DH33 117 aa11.21□□□□□ -0.61
SNRPD3-201ENST00000215829 I3L3M4 83 aa11.21□□□□□ -0.61
SNRPD3-201ENST00000215829 LAGE3Q14657 143 aa11.21□□□□□ -0.61
SNRPD3-201ENST00000215829 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
SNRPD3-201ENST00000215829 C11orf45Q8TAV5 145 aa11.21□□□□□ -0.61
SNRPD3-201ENST00000215829 PACRGQ96M98 296 aaPredicted RBP11.21□□□□□ -0.61
SNRPD3-201ENST00000215829 FABP4P15090 132 aa11.21□□□□□ -0.62
SNRPD3-201ENST00000215829 LOC100131303A0A0U1RQF7 123 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 F5H768 121 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 NHLRC4P0CG21 123 aaPredicted RBP11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 GAGE1Q13065 139 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 GAGE4Q13068 117 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 GAGE5Q13069 117 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
SNRPD3-201ENST00000215829 DNAH9Q9NYC9 4486 aa11.19□□□□□ -0.62
SNRPD3-201ENST00000215829 HTN3P15516 51 aa11.19□□□□□ -0.62
SNRPD3-201ENST00000215829 UBE2D3P61077 147 aa11.19□□□□□ -0.62
SNRPD3-201ENST00000215829 UBE2D2P62837 147 aa11.19□□□□□ -0.62
SNRPD3-201ENST00000215829 A0A096LNJ9 63 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 PAX4O43316 350 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 FCER1GP30273 86 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 NANOS2P60321 138 aaKnown RBP11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 Q6ZTC4 211 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 TSHBP01222 138 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 DEFB104AQ8WTQ1 72 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
SNRPD3-201ENST00000215829 IGHV3-38A0A0C4DH36 116 aa11.17□□□□□ -0.62
SNRPD3-201ENST00000215829 NUDT3O95989 172 aa11.17□□□□□ -0.62
SNRPD3-201ENST00000215829 HBDP02042 147 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms