RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TMEM241Q24JQ0 296 aa11.77□□□□□ -0.53
MRPL28-201ENST00000199706 TMEM97Q5BJF2 176 aa11.77□□□□□ -0.53
MRPL28-201ENST00000199706 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
MRPL28-201ENST00000199706 FRZBQ92765 325 aa11.77□□□□□ -0.53
MRPL28-201ENST00000199706 DNAJC30Q96LL9 226 aa11.77□□□□□ -0.53
MRPL28-201ENST00000199706 C9JQL5 133 aa11.76□□□□□ -0.53
MRPL28-201ENST00000199706 DAZ4Q86SG3 579 aaKnown RBP11.76□□□□□ -0.53
MRPL28-201ENST00000199706 C15orf54Q8N8G6 183 aa11.76□□□□□ -0.53
MRPL28-201ENST00000199706 TSKUQ8WUA8 353 aa11.76□□□□□ -0.53
MRPL28-201ENST00000199706 DAZ3Q9NR90 486 aaKnown RBP11.76□□□□□ -0.53
MRPL28-201ENST00000199706 NAT8Q9UHE5 227 aa11.76□□□□□ -0.53
MRPL28-201ENST00000199706 RAB14P61106 215 aa11.75□□□□□ -0.53
MRPL28-201ENST00000199706 TWIST1Q15672 202 aa11.75□□□□□ -0.53
MRPL28-201ENST00000199706 ISOC2Q96AB3 205 aa11.75□□□□□ -0.53
MRPL28-201ENST00000199706 SSTP61278 116 aa11.74□□□□□ -0.53
MRPL28-201ENST00000199706 PKIAP61925 76 aa11.74□□□□□ -0.53
MRPL28-201ENST00000199706 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
MRPL28-201ENST00000199706 DYNC1H1Q14204 4646 aaKnown RBP11.74□□□□□ -0.53
MRPL28-201ENST00000199706 TRBV6-8A0A0A6YYG3 113 aa11.73□□□□□ -0.53
MRPL28-201ENST00000199706 MGPP08493 103 aa11.73□□□□□ -0.53
MRPL28-201ENST00000199706 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
MRPL28-201ENST00000199706 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
MRPL28-201ENST00000199706 SMIM15Q7Z3B0 74 aa11.73□□□□□ -0.53
MRPL28-201ENST00000199706 NIT1Q86X76 327 aa11.73□□□□□ -0.53
MRPL28-201ENST00000199706 RASL11AQ6T310 242 aa11.72□□□□□ -0.53
MRPL28-201ENST00000199706 BORCS7Q96B45 105 aa11.72□□□□□ -0.53
MRPL28-201ENST00000199706 V9GYV3 84 aa11.72□□□□□ -0.53
MRPL28-201ENST00000199706 HIGD1CA8MV81 97 aa11.71□□□□□ -0.53
MRPL28-201ENST00000199706 CLLU1Q5K131 121 aa11.71□□□□□ -0.53
MRPL28-201ENST00000199706 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
MRPL28-201ENST00000199706 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
MRPL28-201ENST00000199706 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
MRPL28-201ENST00000199706 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
MRPL28-201ENST00000199706 ADIRFQ15847 76 aa11.7□□□□□ -0.54
MRPL28-201ENST00000199706 PGLYRP4Q96LB8 373 aa11.7□□□□□ -0.54
MRPL28-201ENST00000199706 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
MRPL28-201ENST00000199706 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
MRPL28-201ENST00000199706 IGHV3-33P01772 117 aa11.69□□□□□ -0.54
MRPL28-201ENST00000199706 IGHV3-30-3P0DP02 117 aa11.69□□□□□ -0.54
MRPL28-201ENST00000199706 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
MRPL28-201ENST00000199706 ELOBQ15370 118 aa11.69□□□□□ -0.54
MRPL28-201ENST00000199706 A0A087WX48 190 aa11.68□□□□□ -0.54
MRPL28-201ENST00000199706 EREGO14944 169 aa11.68□□□□□ -0.54
MRPL28-201ENST00000199706 IQCJQ1A5X6 159 aa11.68□□□□□ -0.54
MRPL28-201ENST00000199706 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
MRPL28-201ENST00000199706 CDPF1Q6NVV7 123 aa11.67□□□□□ -0.54
MRPL28-201ENST00000199706 KCNIP4Q6PIL6 250 aa11.67□□□□□ -0.54
MRPL28-201ENST00000199706 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
MRPL28-201ENST00000199706 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
MRPL28-201ENST00000199706 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
MRPL28-201ENST00000199706 KIAA1109Q2LD37 5005 aa11.67□□□□□ -0.54
MRPL28-201ENST00000199706 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 A0A087WTM6 91 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 SMIM27A0A1W2PRY6 76 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 PNRC1Q12796 327 aaPredicted RBP11.66□□□□□ -0.54
MRPL28-201ENST00000199706 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 Q8N3U1 123 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 NUP35Q8NFH5 326 aa11.66□□□□□ -0.54
MRPL28-201ENST00000199706 RIGQ13278 110 aa11.65□□□□□ -0.54
MRPL28-201ENST00000199706 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
MRPL28-201ENST00000199706 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
MRPL28-201ENST00000199706 A0A1B0GW15 77 aa11.64□□□□□ -0.55
MRPL28-201ENST00000199706 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
MRPL28-201ENST00000199706 RMI2Q96E14 147 aa11.64□□□□□ -0.55
MRPL28-201ENST00000199706 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
MRPL28-201ENST00000199706 HERC2O95714 4834 aa11.64□□□□□ -0.55
MRPL28-201ENST00000199706 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 C16orf90A8MZG2 172 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 PSCAO43653 123 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 IFITM2Q01629 132 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 Q0VG73 95 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 CHCHD5Q9BSY4 110 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 Q9HAA7 133 aa11.63□□□□□ -0.55
MRPL28-201ENST00000199706 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
MRPL28-201ENST00000199706 PPP1R2P9O14990 202 aa11.62□□□□□ -0.55
MRPL28-201ENST00000199706 NCR2O95944 276 aa11.62□□□□□ -0.55
MRPL28-201ENST00000199706 UQCC3Q6UW78 93 aa11.62□□□□□ -0.55
MRPL28-201ENST00000199706 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
MRPL28-201ENST00000199706 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
MRPL28-201ENST00000199706 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
MRPL28-201ENST00000199706 COTL1Q14019 142 aa11.61□□□□□ -0.55
MRPL28-201ENST00000199706 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
MRPL28-201ENST00000199706 KLK12Q9UKR0 248 aa11.61□□□□□ -0.55
MRPL28-201ENST00000199706 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
MRPL28-201ENST00000199706 A0A1B0GUV1 79 aa11.6□□□□□ -0.55
MRPL28-201ENST00000199706 TMEM262E9PQX1 116 aa11.6□□□□□ -0.55
MRPL28-201ENST00000199706 NTN5Q8WTR8 489 aaPredicted RBP11.6□□□□□ -0.55
MRPL28-201ENST00000199706 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
MRPL28-201ENST00000199706 PPP1R17O96001 155 aa11.59□□□□□ -0.55
MRPL28-201ENST00000199706 S100A8P05109 93 aa11.59□□□□□ -0.55
MRPL28-201ENST00000199706 RAB4AP20338 218 aa11.59□□□□□ -0.55
MRPL28-201ENST00000199706 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
MRPL28-201ENST00000199706 PRR34Q9NV39 138 aa11.59□□□□□ -0.55
MRPL28-201ENST00000199706 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
MRPL28-201ENST00000199706 CDK2AP2O75956 126 aa11.58□□□□□ -0.56
MRPL28-201ENST00000199706 RBX1P62877 108 aa11.58□□□□□ -0.56
MRPL28-201ENST00000199706 MIAQ16674 131 aa11.58□□□□□ -0.56
MRPL28-201ENST00000199706 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms