RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GAGE12IP0CL82 117 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 HLA-DRB4P13762 266 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 CST9LQ9H4G1 147 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 HLA-DRB4X5D2U9 266 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 F8VRH5 84 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 ZNRF2Q8NHG8 242 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 H3BMG7 143 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 ZNF415Q09FC8 603 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 CCL24O00175 119 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 Q8N1Y9 231 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 Q8N6K4 173 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 TRBV25-1A0A075B6N4 114 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.13□□□□□ -0.95
CHPF2-201ENST00000035307 IGKV2-29A2NJV5 120 aaPredicted RBP9.13□□□□□ -0.95
CHPF2-201ENST00000035307 FXYD2P54710 66 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 SAMD13Q5VXD3 122 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
CHPF2-201ENST00000035307 Q6ZSV7 163 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 C11orf21Q9P2W6 132 aa9.13□□□□□ -0.95
CHPF2-201ENST00000035307 INSP01308 110 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 P0DMU3 169 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 FAM231AP0DMU4 169 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 FAM231CP0DMU5 169 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 ADAMTSL5Q6ZMM2 481 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 MRPL52Q86TS9 123 aaKnown RBP9.12□□□□□ -0.95
CHPF2-201ENST00000035307 MUC4Q99102 2169 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 EBI3Q14213 229 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 Q6YL49 198 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 PSMG3-AS1Q96PY0 264 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
CHPF2-201ENST00000035307 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
CHPF2-201ENST00000035307 TMEM61Q8N0U2 210 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 TRAV8-2A0A0B4J237 113 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 LGALS1P09382 135 aaKnown RBP9.11□□□□□ -0.95
CHPF2-201ENST00000035307 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 ELANEP08246 267 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 PRR9Q5T870 116 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
CHPF2-201ENST00000035307 FSTL3O95633 263 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 CTRLP40313 264 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 RPL36AP83881 106 aaKnown RBP9.1□□□□□ -0.95
CHPF2-201ENST00000035307 PMVKQ15126 192 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 OCIAD2Q56VL3 154 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 RPL36ALQ969Q0 106 aaKnown RBP9.1□□□□□ -0.95
CHPF2-201ENST00000035307 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
CHPF2-201ENST00000035307 H3BRM9 83 aa9.1□□□□□ -0.95
CHPF2-201ENST00000035307 A0A087WX48 190 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 C9orf118A6NHY6 69 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 DEFB125Q8N687 156 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 URB1-AS1Q96HZ7 61 aa9.09□□□□□ -0.95
CHPF2-201ENST00000035307 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 AZU1P20160 251 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 TRBV7-9A0A0J9YWB2 115 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 TAX1BP3O14907 124 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 LINC00158P58513 81 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 DEFB121Q5J5C9 76 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 C9orf47Q6ZRZ4 202 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 WFDC10AQ9H1F0 79 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 U3KQE9 123 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 ODF1Q14990 250 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 NOP10Q9NPE3 64 aaKnown RBP9.08□□□□□ -0.96
CHPF2-201ENST00000035307 HIVEP1P15822 2718 aa9.08□□□□□ -0.96
CHPF2-201ENST00000035307 RBAKDNA6NC62 111 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 DEFB4AO15263 64 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 PRIMA1Q86XR5 153 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
CHPF2-201ENST00000035307 I3L3M4 83 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 C9JAW5 83 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 IGLC6P0CF74 106 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 GAGE6Q13070 117 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 DAND5Q8N907 189 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
CHPF2-201ENST00000035307 ZNF702PQ9H963 129 aa9.07□□□□□ -0.96
CHPF2-201ENST00000035307 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
CHPF2-201ENST00000035307 A0A1W2PPM0 123 aa9.06□□□□□ -0.96
CHPF2-201ENST00000035307 J3QQQ9 107 aa9.06□□□□□ -0.96
CHPF2-201ENST00000035307 IGHG4P01861 327 aa9.06□□□□□ -0.96
CHPF2-201ENST00000035307 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
CHPF2-201ENST00000035307 PFN2P35080 140 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 ZFP2Q6ZN57 461 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 CEND1Q8N111 149 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 Q8N976 141 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 DNAL4O96015 105 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 M0R2P5 195 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 C12orf74Q32Q52 190 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 LINC01006Q8NI28 216 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms