RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 C14orf178Q8N769 122 aaPredicted RBP4.64□□□□□ -1.67
CHD2-221ENST00000635856 SPTBN2O15020 2390 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 USP34Q70CQ2 3546 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 RIF1Q5UIP0 2472 aaKnown RBP4.64□□□□□ -1.67
CHD2-221ENST00000635856 IGKV2-40A0A087WW87 121 aaPredicted RBP4.64□□□□□ -1.67
CHD2-221ENST00000635856 IGKV2D-40P01614 121 aaPredicted RBP4.64□□□□□ -1.67
CHD2-221ENST00000635856 HOXB4P17483 251 aaPredicted RBP4.64□□□□□ -1.67
CHD2-221ENST00000635856 FAM222AQ5U5X8 452 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 TMEM105Q8N8V8 129 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 DCTN5Q9BTE1 182 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 PHLDA3Q9Y5J5 127 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 SNURFQ9Y675 71 aa4.64□□□□□ -1.67
CHD2-221ENST00000635856 CACNA1HO95180 2353 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 IGKV3D-11A0A0A0MRZ8 115 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 PRB4P10163 310 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 FGF23Q9GZV9 251 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 CXXC4Q9H2H0 198 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 RP1L1Q8IWN7 2480 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 ADARB2-AS1A8MUL3 147 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 M0R381 172 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 WT1P19544 449 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 FP248Q71RG6 208 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 NDUFA4L2Q9NRX3 87 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 BDP1A6H8Y1 2624 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 CACNA1GO43497 2377 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 EP300Q09472 2414 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 A0A0J9YXY3 114 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 F6UB75 175 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 ZNHIT1O43257 154 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 APOC4P55056 127 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 PCOLCEQ15113 449 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 LEAP2Q969E1 77 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 ZNF71Q9NQZ8 489 aaPredicted RBP4.63□□□□□ -1.67
CHD2-221ENST00000635856 Q9UF83 564 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 PCSK5Q92824 1860 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 CHD9Q3L8U1 2897 aa4.63□□□□□ -1.67
CHD2-221ENST00000635856 DMDP11532 3685 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 IGLV3-32A0A0A0MS00 114 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 M0R1B8 84 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 NDPQ00604 133 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 ECSCRQ19T08 205 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 C14orf132Q9NPU4 83 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 NDUFA12Q9UI09 145 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 EML6Q6ZMW3 1958 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 IGLV2-18A0A075B6J9 118 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 VCYO14598 125 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 GAS8-AS1O95177 125 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 RPL27AP46776 148 aaKnown RBP4.62□□□□□ -1.67
CHD2-221ENST00000635856 Q8TAT8 98 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 TIMM17AQ99595 171 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 RNF7Q9UBF6 113 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 UBE2D4Q9Y2X8 147 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 PATE3B3GLJ2 98 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 H3BS24 57 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 NDUFS5O43920 106 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 BCE1O60756 84 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 MIAQ16674 131 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 Q6ZRU5 148 aa4.62□□□□□ -1.67
CHD2-221ENST00000635856 ARHGEF17Q96PE2 2063 aaPredicted RBP4.62□□□□□ -1.67
CHD2-221ENST00000635856 TEX22C9J3V5 150 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 UBE2BP63146 152 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 CNOT1A5YKK6 2376 aaKnown RBP4.61□□□□□ -1.67
CHD2-221ENST00000635856 A0A0J9YX75 114 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 H7BZZ5 65 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 ESRGQ1W209 222 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 ENHOQ6UWT2 76 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 TMEM61Q8N0U2 210 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
CHD2-221ENST00000635856 POLEQ07864 2286 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 ZNF407Q9C0G0 2248 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 COL5A1P20908 1838 aaPredicted RBP4.61□□□□□ -1.67
CHD2-221ENST00000635856 TRBV12-3P01733 135 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 NRACQ8N912 160 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 C16orf95Q9H693 158 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 TRAV13-2A0A0B4J235 113 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 TRGV3P03979 118 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 FUSP35637 526 aaKnown RBP eCLIP4.61□□□□□ -1.67
CHD2-221ENST00000635856 PVRIGQ6DKI7 326 aa4.61□□□□□ -1.67
CHD2-221ENST00000635856 IGKV1D-37A0A075B6S9 117 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 TSPEAR-AS2P59090 65 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 CNFNQ9BYD5 112 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 MIFP14174 115 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 ADORA2A-AS1P86434 159 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 TMEM30BQ3MIR4 351 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.6□□□□□ -1.67
CHD2-221ENST00000635856 IGFL2Q6UWQ7 119 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 WDR86Q86TI4 376 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 KLF14Q8TD94 323 aaPredicted RBP4.6□□□□□ -1.67
CHD2-221ENST00000635856 CTSZQ9UBR2 303 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 AHCTF1Q8WYP5 2266 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 SPTA1P02549 2419 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 RP1P56715 2156 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 NACAE9PAV3 2078 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 TRBV27A0A0K0K1C4 114 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 APELAP0DMC3 54 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 TMEM167AQ8TBQ9 72 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 RMI2Q96E14 147 aa4.6□□□□□ -1.67
CHD2-221ENST00000635856 BEAN1Q3B7T3 259 aa4.59□□□□□ -1.67
CHD2-221ENST00000635856 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
CHD2-221ENST00000635856 SPTSSBQ8NFR3 76 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms