RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CRPP02741 224 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 ASIPP42127 132 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 FLI1Q01543 452 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-228ENST00000629725 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 TMEM262E9PQX1 116 aa12.92□□□□□ -0.34
TARDBP-228ENST00000629725 GCHFRP30047 84 aa12.92□□□□□ -0.34
TARDBP-228ENST00000629725 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
TARDBP-228ENST00000629725 C9orf163Q8N9P6 203 aa12.92□□□□□ -0.34
TARDBP-228ENST00000629725 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
TARDBP-228ENST00000629725 IL36BQ9NZH7 164 aa12.92□□□□□ -0.34
TARDBP-228ENST00000629725 HLA-DQA1P01909 254 aa12.91□□□□□ -0.34
TARDBP-228ENST00000629725 PRSS1P07477 247 aa12.91□□□□□ -0.34
TARDBP-228ENST00000629725 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
TARDBP-228ENST00000629725 SAPCD1Q5SSQ6 148 aa12.91□□□□□ -0.34
TARDBP-228ENST00000629725 PSMG3Q9BT73 122 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-228ENST00000629725 PANO1I0J062 215 aa12.9□□□□□ -0.34
TARDBP-228ENST00000629725 C15orf54Q8N8G6 183 aa12.9□□□□□ -0.34
TARDBP-228ENST00000629725 SUN5Q8TC36 379 aa12.9□□□□□ -0.34
TARDBP-228ENST00000629725 AQP10Q96PS8 301 aa12.9□□□□□ -0.34
TARDBP-228ENST00000629725 H3BVH4 76 aa12.89□□□□□ -0.35
TARDBP-228ENST00000629725 SUMO1P63165 101 aaKnown RBP12.89□□□□□ -0.35
TARDBP-228ENST00000629725 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
TARDBP-228ENST00000629725 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
TARDBP-228ENST00000629725 MBP02144 154 aa12.88□□□□□ -0.35
TARDBP-228ENST00000629725 ANGP03950 147 aaKnown RBP12.88□□□□□ -0.35
TARDBP-228ENST00000629725 RPL36AP83881 106 aaKnown RBP12.88□□□□□ -0.35
TARDBP-228ENST00000629725 RPL36ALQ969Q0 106 aaKnown RBP12.88□□□□□ -0.35
TARDBP-228ENST00000629725 MED28Q9H204 178 aa12.88□□□□□ -0.35
TARDBP-228ENST00000629725 TMEM167BQ9NRX6 74 aa12.88□□□□□ -0.35
TARDBP-228ENST00000629725 TRBV7-3A0A075B6L6 115 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 A0A087WWL8 130 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 CXorf1O96002 111 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 UBE2D3P61077 147 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 UBE2D2P62837 147 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 SERF2P84101 59 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 SDIM1Q6ZPB5 146 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
TARDBP-228ENST00000629725 B4DEV8 164 aa12.86□□□□□ -0.35
TARDBP-228ENST00000629725 RPL19P84098 196 aaKnown RBP12.86□□□□□ -0.35
TARDBP-228ENST00000629725 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
TARDBP-228ENST00000629725 ACTR3CQ9C0K3 210 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-228ENST00000629725 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
TARDBP-228ENST00000629725 TRBV6-8A0A0A6YYG3 113 aa12.85□□□□□ -0.35
TARDBP-228ENST00000629725 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
TARDBP-228ENST00000629725 MIAQ16674 131 aa12.85□□□□□ -0.35
TARDBP-228ENST00000629725 Q5BKY6 102 aa12.85□□□□□ -0.35
TARDBP-228ENST00000629725 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
TARDBP-228ENST00000629725 TNFSF18Q9UNG2 199 aa12.85□□□□□ -0.35
TARDBP-228ENST00000629725 PTTG1O95997 202 aa12.84□□□□□ -0.35
TARDBP-228ENST00000629725 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
TARDBP-228ENST00000629725 ARL2-SNX15V9GYD0 113 aa12.84□□□□□ -0.35
TARDBP-228ENST00000629725 TRAV34A0A0B4J273 112 aa12.83□□□□□ -0.36
TARDBP-228ENST00000629725 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
TARDBP-228ENST00000629725 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
TARDBP-228ENST00000629725 M0R381 172 aa12.82□□□□□ -0.36
TARDBP-228ENST00000629725 CIRBPQ14011 172 aaKnown RBP12.82□□□□□ -0.36
TARDBP-228ENST00000629725 RPL7L1Q6DKI1 246 aaKnown RBP12.82□□□□□ -0.36
TARDBP-228ENST00000629725 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-228ENST00000629725 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
TARDBP-228ENST00000629725 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
TARDBP-228ENST00000629725 M0R036 132 aa12.81□□□□□ -0.36
TARDBP-228ENST00000629725 GIPP09681 153 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-228ENST00000629725 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
TARDBP-228ENST00000629725 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
TARDBP-228ENST00000629725 BORCS7-ASMTA0A0B4J1R7 106 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 GRIFINA4D1Z8 144 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 IFNA7P01567 189 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 TPT1P13693 172 aaKnown RBP12.8□□□□□ -0.36
TARDBP-228ENST00000629725 UBE2G2P60604 165 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 PKIAP61925 76 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 ZNF726P1Q15940 193 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 CLRN3Q8NCR9 226 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 BATF3Q9NR55 127 aa12.8□□□□□ -0.36
TARDBP-228ENST00000629725 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
TARDBP-228ENST00000629725 CTXND1A0A1B0GTU2 59 aa12.79□□□□□ -0.36
TARDBP-228ENST00000629725 PRR34Q9NV39 138 aa12.79□□□□□ -0.36
TARDBP-228ENST00000629725 CRIP1P50238 77 aa12.78□□□□□ -0.36
TARDBP-228ENST00000629725 CNBPP62633 177 aaKnown RBP12.78□□□□□ -0.36
TARDBP-228ENST00000629725 KRTAP26-1Q6PEX3 210 aa12.78□□□□□ -0.36
TARDBP-228ENST00000629725 CLPSL2Q6UWE3 100 aa12.78□□□□□ -0.36
TARDBP-228ENST00000629725 Q86TA4 180 aa12.78□□□□□ -0.36
TARDBP-228ENST00000629725 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
TARDBP-228ENST00000629725 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-228ENST00000629725 A0A087WYN8 130 aa12.77□□□□□ -0.37
TARDBP-228ENST00000629725 PEX7O00628 323 aa12.77□□□□□ -0.37
TARDBP-228ENST00000629725 LINC00269Q8N2A0 174 aa12.77□□□□□ -0.37
TARDBP-228ENST00000629725 RNF185Q96GF1 192 aa12.77□□□□□ -0.37
TARDBP-228ENST00000629725 LINC01600Q96MT4 127 aa12.77□□□□□ -0.37
TARDBP-228ENST00000629725 SH2D1AO60880 128 aa12.76□□□□□ -0.37
TARDBP-228ENST00000629725 RAB4BP61018 213 aa12.76□□□□□ -0.37
TARDBP-228ENST00000629725 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
TARDBP-228ENST00000629725 IGHV3-64A0A075B6Q5 118 aa12.75□□□□□ -0.37
TARDBP-228ENST00000629725 hDV102S1A0JD36 115 aa12.75□□□□□ -0.37
TARDBP-228ENST00000629725 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
TARDBP-228ENST00000629725 PHOX2AO14813 284 aa12.75□□□□□ -0.37
TARDBP-228ENST00000629725 AKR1C8PQ5T2L2 129 aa12.75□□□□□ -0.37
TARDBP-228ENST00000629725 FAM162BQ5T6X4 162 aa12.75□□□□□ -0.37
TARDBP-228ENST00000629725 TMSB15BA0A087X1C1 80 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms