RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 C15orf53Q8NAA6 179 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 GATD1Q8NB37 220 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 SGK494Q96LW2 274 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 SHANK2-AS3Q9BTD1 123 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 A8MWL6 223 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 H3BRN7 92 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 H3BTX0 84 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 ID1P41134 155 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 HBBP68871 147 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 RRN3P1Q2M238 152 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 PRR27Q6MZM9 219 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 FOXI2Q6ZQN5 318 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 SPATA12Q7Z6I5 190 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 Q8N1X5 172 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 C6orf223Q8N319 242 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 TMEM208Q9BTX3 173 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 TRBV19A0A075B6N1 114 aa5.52□□□□□ -1.53
CLK1-215ENST00000621181 LYZP61626 148 aa5.52□□□□□ -1.53
CLK1-215ENST00000621181 SPATA45Q537H7 98 aa5.52□□□□□ -1.53
CLK1-215ENST00000621181 SCRT2Q9NQ03 307 aa5.52□□□□□ -1.53
CLK1-215ENST00000621181 PKD1P98161 4303 aa5.52□□□□□ -1.53
CLK1-215ENST00000621181 TRAV8-1A0A0A6YYK1 113 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 NBDYA0A0U1RRE5 68 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 CRXO43186 299 aaPredicted RBP5.51□□□□□ -1.53
CLK1-215ENST00000621181 P01737 135 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 CAMPP49913 170 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 PSG9Q00887 426 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 EXOC3-AS1Q8N2X6 119 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 TMEM75Q8N9X5 138 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 RNF125Q96EQ8 232 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 C17orf77Q96MU5 243 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 NDFIP1Q9BT67 221 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 NUDT3O95989 172 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 CRIP1P50238 77 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 CCL18P55774 89 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 GAGE1Q13065 139 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 GOLT1AQ6ZVE7 132 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 COX8CQ7Z4L0 72 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 C1orf158Q8N1D5 194 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 LYPD1Q8N2G4 141 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 ZC2HC1AQ96GY0 325 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 PGLYRP4Q96LB8 373 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 CLUHP3Q96NS8 147 aa5.51□□□□□ -1.53
CLK1-215ENST00000621181 TRAV9-2A0A087WT02 112 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 C20orf202A1L168 122 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 F5H768 121 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 F6UB75 175 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 HSBP1O75506 76 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 DEFB130BP0DP73 79 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 DEFB130AP0DP74 79 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 NTF3P20783 257 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 PMCHL1Q16048 86 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 MAJINQ3KP22 176 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 Q8N3U1 123 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 OR2D3Q8NGH3 330 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 ZNRF2Q8NHG8 242 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 CHCHD1Q96BP2 118 aaKnown RBP5.5□□□□□ -1.53
CLK1-215ENST00000621181 RPH3ALQ9UNE2 315 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 RNF24Q9Y225 148 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 ZFP30Q9Y2G7 519 aa5.5□□□□□ -1.53
CLK1-215ENST00000621181 M0R2Z0 102 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 DLEU1O43261 78 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 BTF3P20290 206 aaKnown RBP5.49□□□□□ -1.53
CLK1-215ENST00000621181 FAM162BQ5T6X4 162 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 RNASEKQ6P5S7 137 aaKnown RBP5.49□□□□□ -1.53
CLK1-215ENST00000621181 PRNTQ86SH4 94 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 BPIFA4PQ86YQ2 179 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 BORCS7Q96B45 105 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 MRPS16Q9Y3D3 137 aaKnown RBP5.49□□□□□ -1.53
CLK1-215ENST00000621181 HSPG2P98160 4391 aa5.49□□□□□ -1.53
CLK1-215ENST00000621181 IGHV1-24A0A0C4DH33 117 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 A0A0J9YX75 114 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 LYRM9A8MSI8 78 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 SOCS3O14543 225 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 ZNF25P17030 456 aaPredicted RBP5.48□□□□□ -1.53
CLK1-215ENST00000621181 TSPOP30536 169 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 PDE6HQ13956 83 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 PSG3Q16557 428 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 SAMD13Q5VXD3 122 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 LINC00173Q6ZV60 143 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 ARL6IP6Q8N6S5 226 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 STPG4Q8N801 248 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 PSG8Q9UQ74 426 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 PRM2P04554 102 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 G0S2P27469 103 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 ATOH7Q8N100 152 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 DAZAP1Q96EP5 407 aaKnown RBP5.48□□□□□ -1.53
CLK1-215ENST00000621181 C16orf92Q96LL3 132 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 LAMTOR2Q9Y2Q5 125 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 LINC00588Q9Y4M8 146 aa5.48□□□□□ -1.53
CLK1-215ENST00000621181 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
CLK1-215ENST00000621181 A0A1B0GUT8 65 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 A0A1B0GW15 77 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 SYS1-DBNDD2H3BUS1 97 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 M0R3E3 92 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
CLK1-215ENST00000621181 INSP01308 110 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 ATP5G1P05496 136 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 OR5AL1P0C617 328 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms