RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 GAGE5Q13069 117 aa15.05■□□□□ -0
CBWD3-212ENST00000616550 GAGE13Q4V321 117 aa15.05■□□□□ -0
CBWD3-212ENST00000616550 LELP1Q5T871 98 aa15.05■□□□□ -0
CBWD3-212ENST00000616550 C10orf126Q8N4M7 172 aa15.05■□□□□ -0
CBWD3-212ENST00000616550 C14orf178Q8N769 122 aaPredicted RBP15.05■□□□□ -0
CBWD3-212ENST00000616550 DAZAP1Q96EP5 407 aaKnown RBP15.05■□□□□ -0
CBWD3-212ENST00000616550 TNFRSF18Q9Y5U5 241 aa15.05■□□□□ -0
CBWD3-212ENST00000616550 RAB19A4D1S5 217 aa15.04■□□□□ -0
CBWD3-212ENST00000616550 ALKAL2Q6UX46 152 aa15.04■□□□□ -0
CBWD3-212ENST00000616550 SMIM12Q96EX1 92 aa15.04■□□□□ -0
CBWD3-212ENST00000616550 MSRB1Q9NZV6 116 aa15.04■□□□□ -0
CBWD3-212ENST00000616550 BLOC1S1P78537 153 aa15.03■□□□□ -0
CBWD3-212ENST00000616550 Q6ZRN7 208 aaPredicted RBP15.03■□□□□ -0
CBWD3-212ENST00000616550 OR10AG1Q8NH19 301 aa15.03■□□□□ -0
CBWD3-212ENST00000616550 C16orf90A8MZG2 172 aa15.02■□□□□ -0
CBWD3-212ENST00000616550 SNAI2O43623 268 aa15.02■□□□□ -0
CBWD3-212ENST00000616550 IGLV2-8P01709 118 aa15.02■□□□□ -0
CBWD3-212ENST00000616550 OR5AL1P0C617 328 aa15.02■□□□□ -0
CBWD3-212ENST00000616550 LINC01556Q5JQF7 62 aa15.02■□□□□ -0
CBWD3-212ENST00000616550 SPANXN1Q5VSR9 72 aa15.02■□□□□ -0
CBWD3-212ENST00000616550 SSBP4Q9BWG4 385 aaPredicted RBP15.02■□□□□ -0
CBWD3-212ENST00000616550 A0A1B0GVG6 124 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 LINC00694P0DN24 101 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 SPATA12Q7Z6I5 190 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 BIN3Q9NQY0 253 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 Q9UF83 564 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 PKHD1P08F94 4074 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 PKD1P98161 4303 aa15.01□□□□□ -0.01
CBWD3-212ENST00000616550 MUC21A0A0G2JKD1 596 aa14.99□□□□□ -0.01
CBWD3-212ENST00000616550 MUC21A0A140T8X8 626 aa14.99□□□□□ -0.01
CBWD3-212ENST00000616550 NKX2-5P52952 324 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-212ENST00000616550 RPS20P60866 119 aaKnown RBP14.99□□□□□ -0.01
CBWD3-212ENST00000616550 SSTP61278 116 aa14.99□□□□□ -0.01
CBWD3-212ENST00000616550 OR2D3Q8NGH3 330 aa14.99□□□□□ -0.01
CBWD3-212ENST00000616550 TRBV10-1A0A0K0K1A3 114 aa14.98□□□□□ -0.01
CBWD3-212ENST00000616550 EREGO14944 169 aa14.98□□□□□ -0.01
CBWD3-212ENST00000616550 A0A087WWC5 75 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 XKRY2A2RUG3 117 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 C19orf71A6NCJ1 209 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 P01737 135 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 IGHV3-30P01768 117 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 IGHV3-33P01772 117 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 IGHV3-30-3P0DP02 117 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 IGHV3-30-5P0DP03 117 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 RAB4BP61018 213 aa14.97□□□□□ -0.01
CBWD3-212ENST00000616550 TRBV20OR9-2A0A075B6H5 130 aa14.96□□□□□ -0.01
CBWD3-212ENST00000616550 GZMBP10144 247 aa14.96□□□□□ -0.01
CBWD3-212ENST00000616550 ERVFC1-1P60608 527 aa14.96□□□□□ -0.01
CBWD3-212ENST00000616550 RPL36AP83881 106 aaKnown RBP14.96□□□□□ -0.01
CBWD3-212ENST00000616550 ZNF56Q15929 161 aa14.96□□□□□ -0.01
CBWD3-212ENST00000616550 FER1L6-AS1Q8NA97 138 aa14.96□□□□□ -0.01
CBWD3-212ENST00000616550 RPL36ALQ969Q0 106 aaKnown RBP14.96□□□□□ -0.01
CBWD3-212ENST00000616550 TPPP3Q9BW30 176 aa14.96□□□□□ -0.01
CBWD3-212ENST00000616550 RBFOX3A6NFN3 312 aa14.95□□□□□ -0.02
CBWD3-212ENST00000616550 IBA57-AS1B1ANH7 110 aa14.95□□□□□ -0.02
CBWD3-212ENST00000616550 SMIM17P0DL12 118 aa14.95□□□□□ -0.02
CBWD3-212ENST00000616550 LYPD6BQ8NI32 183 aa14.95□□□□□ -0.02
CBWD3-212ENST00000616550 F5H697 171 aa14.94□□□□□ -0.02
CBWD3-212ENST00000616550 TRBV7-3A0A075B6L6 115 aa14.93□□□□□ -0.02
CBWD3-212ENST00000616550 IGLC6P0CF74 106 aa14.93□□□□□ -0.02
CBWD3-212ENST00000616550 KRTAP10-2P60368 255 aa14.93□□□□□ -0.02
CBWD3-212ENST00000616550 AP1S3Q96PC3 154 aa14.93□□□□□ -0.02
CBWD3-212ENST00000616550 KRTAP17-1Q9BYP8 105 aa14.93□□□□□ -0.02
CBWD3-212ENST00000616550 CACNG7P62955 275 aa14.92□□□□□ -0.02
CBWD3-212ENST00000616550 F2Z2F3 143 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 TMEM250H0YL14 139 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 PSCAO43653 123 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 NUDT10Q8NFP7 164 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 OR10G8Q8NGN5 311 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 OCC1Q8TAD7 63 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 NUDT11Q96G61 164 aa14.91□□□□□ -0.02
CBWD3-212ENST00000616550 A0A087WTM6 91 aa14.9□□□□□ -0.02
CBWD3-212ENST00000616550 UBE2D3P61077 147 aa14.9□□□□□ -0.02
CBWD3-212ENST00000616550 UBE2D2P62837 147 aa14.9□□□□□ -0.02
CBWD3-212ENST00000616550 Q9HAA7 133 aa14.9□□□□□ -0.02
CBWD3-212ENST00000616550 PGPEP1Q9NXJ5 209 aa14.9□□□□□ -0.02
CBWD3-212ENST00000616550 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-212ENST00000616550 NEXN-AS1Q8NBZ9 246 aa14.89□□□□□ -0.03
CBWD3-212ENST00000616550 EIF5A2Q9GZV4 153 aaKnown RBP14.89□□□□□ -0.03
CBWD3-212ENST00000616550 KIF25-AS1Q9Y6Z4 181 aa14.89□□□□□ -0.03
CBWD3-212ENST00000616550 URGCP-MRPS24S4R325 110 aa14.89□□□□□ -0.03
CBWD3-212ENST00000616550 LAGE3Q14657 143 aa14.88□□□□□ -0.03
CBWD3-212ENST00000616550 LYZL1Q6UWQ5 148 aa14.88□□□□□ -0.03
CBWD3-212ENST00000616550 Q8N3U1 123 aa14.88□□□□□ -0.03
CBWD3-212ENST00000616550 RNASE7Q9H1E1 156 aaKnown RBP14.88□□□□□ -0.03
CBWD3-212ENST00000616550 K7EN84 100 aa14.87□□□□□ -0.03
CBWD3-212ENST00000616550 CEBPGP53567 150 aa14.87□□□□□ -0.03
CBWD3-212ENST00000616550 TOR2AQ5JU69 321 aa14.87□□□□□ -0.03
CBWD3-212ENST00000616550 RPP21Q9H633 154 aaKnown RBP14.87□□□□□ -0.03
CBWD3-212ENST00000616550 DNAH11Q96DT5 4516 aa14.86□□□□□ -0.03
CBWD3-212ENST00000616550 MGPP08493 103 aa14.86□□□□□ -0.03
CBWD3-212ENST00000616550 NIT1Q86X76 327 aa14.86□□□□□ -0.03
CBWD3-212ENST00000616550 TRAV8-3A0A0A6YYJ7 113 aa14.85□□□□□ -0.03
CBWD3-212ENST00000616550 CDK2AP2O75956 126 aa14.85□□□□□ -0.03
CBWD3-212ENST00000616550 TRGC1P0CF51 173 aa14.85□□□□□ -0.03
CBWD3-212ENST00000616550 KCNIP4Q6PIL6 250 aa14.85□□□□□ -0.03
CBWD3-212ENST00000616550 DAZ4Q86SG3 579 aaKnown RBP14.85□□□□□ -0.03
CBWD3-212ENST00000616550 TM2D2Q9BX73 214 aa14.85□□□□□ -0.03
CBWD3-212ENST00000616550 DAZ3Q9NR90 486 aaKnown RBP14.85□□□□□ -0.03
CBWD3-212ENST00000616550 DYNC1H1Q14204 4646 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms