RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 A0A1B0GWB2 263 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 C11orf71Q6IPW1 123 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGHV7-4-1A0A0J9YVY3 117 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 H7C2G1 150 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 CHAC1Q9BUX1 264 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 TRBV25-1A0A075B6N4 114 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGKV3D-20A0A0C4DH25 116 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 ETDBQ3ZM63 59 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 GEMIN7Q9H840 131 aaKnown RBP4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 TET2Q6N021 2002 aaPredicted RBP4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 KNCNA6PVL3 124 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 DEFB112Q30KQ8 113 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 ZFAND3Q9H8U3 227 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 COL5A1P20908 1838 aaPredicted RBP4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 RBAKDNA6NC62 111 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 LGALS3P17931 250 aaKnown RBP4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 PLNP26678 52 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 MRPL53Q96EL3 112 aaKnown RBP4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 DUX3Q96PT4 197 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 MRPL16Q9NX20 251 aaKnown RBP4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 K7EP13 123 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 CCL25O15444 150 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 GNRH2O43555 120 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 BOD1L2Q8IYS8 172 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 TRBV12-3P01733 135 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 CHTOPQ9Y3Y2 248 aaKnown RBP4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 VPREB1P12018 145 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 TCTEX1D4Q5JR98 221 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 SAMD5Q5TGI4 173 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 C16orf54Q6UWD8 224 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 SMIM9A6NGZ8 99 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 ELANEP08246 267 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 LINC01587Q99440 93 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 CST9LQ9H4G1 147 aa4.32□□□□□ -1.72
SYNCRIP-204ENST00000616122 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 CDKN1BP46527 198 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 F8W735 103 aaPredicted RBP4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 Q8N976 141 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 C20orf78Q9BR46 151 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 PRADC1Q9BSG0 188 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 PRSS29PA6NIE9 313 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 H3BUA1 57 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 MRPS12O15235 138 aaKnown RBP4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGF1P05019 195 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 TEX29Q8N6K0 151 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 LINC01356Q8N9X3 169 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 TP53TG1Q9Y2A0 90 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 PCSK5Q92824 1860 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 C9orf47Q6ZRZ4 202 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 ZFAND2AQ8N6M9 145 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 MPLKIPQ8TAP9 179 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 MUC3AQ02505 3323 aa4.31□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGHV1OR15-1A0A075B7D0 117 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 COX6CP09669 75 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 OR5A1Q8NGJ0 315 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 YAE1D1Q9NRH1 226 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 TRGV11A0A075B6L2 103 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 TSHBP01222 138 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 OCIAD2Q56VL3 154 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 LRBAP50851 2863 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 ODF1Q14990 250 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 TMEM258P61165 79 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 GTSF1LQ9H1H1 148 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 KLK9Q9UKQ9 250 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 KMT2BQ9UMN6 2715 aaPredicted RBP4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 TAX1BP3O14907 124 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 PEMTQ9UBM1 199 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 SMAD5-AS1Q9Y6J3 95 aa4.3□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGHV3-73A0A0B4J1V6 119 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 HOXD3P31249 432 aaPredicted RBP4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 RPL39LQ96EH5 51 aaKnown RBP4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 HLA-DRB4P13762 266 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 ZNF418Q8TF45 676 aaPredicted RBP4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 PGPEP1Q9NXJ5 209 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 HLA-DRB4X5D2U9 266 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 FXYD2P54710 66 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 XCL2Q9UBD3 114 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 H3BRM9 83 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 TRGV2A0A075B6R0 118 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 TRBV7-9A0A0J9YWB2 115 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 K7EMT4 169 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 GPHB5Q86YW7 130 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 KLHL30-AS1Q8NEE0 82 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 JPT2Q9H910 190 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 DCHS2Q6V1P9 2916 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 A0A087WX48 190 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
SYNCRIP-204ENST00000616122 VPREB3Q9UKI3 123 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms