RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
GGA3-220ENST00000613421 DEFB1P60022 68 aa10.57□□□□□ -0.72
GGA3-220ENST00000613421 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
GGA3-220ENST00000613421 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
GGA3-220ENST00000613421 WDR87Q6ZQQ6 2873 aa10.57□□□□□ -0.72
GGA3-220ENST00000613421 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
GGA3-220ENST00000613421 SPANXA1Q9NS26 97 aa10.57□□□□□ -0.72
GGA3-220ENST00000613421 C2orf70A6NJV1 201 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 Q8N1Y9 231 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 MBD6Q96DN6 1003 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 A6NDX4 124 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 APOC4P55056 127 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 GAGE2AQ6NT46 116 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 TMEM89A2RUT3 159 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
GGA3-220ENST00000613421 KIAA1549Q9HCM3 1950 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 ATG2AQ2TAZ0 1938 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 TRAV12-1A0A0B4J245 112 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
GGA3-220ENST00000613421 LINC01548A6NM66 108 aa10.55□□□□□ -0.72
GGA3-220ENST00000613421 LY6LH3BQJ8 138 aa10.55□□□□□ -0.72
GGA3-220ENST00000613421 C3orf56Q8N813 242 aa10.54□□□□□ -0.72
GGA3-220ENST00000613421 TOMM6Q96B49 74 aa10.54□□□□□ -0.72
GGA3-220ENST00000613421 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
GGA3-220ENST00000613421 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
GGA3-220ENST00000613421 CFC1BP0CG36 223 aa10.54□□□□□ -0.72
GGA3-220ENST00000613421 CFC1P0CG37 223 aa10.54□□□□□ -0.72
GGA3-220ENST00000613421 INAFM2P0DMQ5 153 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
GGA3-220ENST00000613421 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
GGA3-220ENST00000613421 DEFB121Q5J5C9 76 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 HIGD1BQ9P298 99 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 HCFC1P51610 2035 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 A0A0J9YXV3 536 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 IGLL5B9A064 214 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 ODF1Q14990 250 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 CACNA1AO00555 2505 aa10.53□□□□□ -0.72
GGA3-220ENST00000613421 LOXL1Q08397 574 aaPredicted RBP10.52□□□□□ -0.72
GGA3-220ENST00000613421 A0A096LPF7 62 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 C19orf84I3L1E1 186 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 NXPH4O95158 308 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 FXYD2P54710 66 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 UBE2DNLQ8IWF7 75 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 PLXNB1O43157 2135 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 EBI3Q14213 229 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 Q9H8V8 135 aa10.52□□□□□ -0.73
GGA3-220ENST00000613421 TRAV13-2A0A0B4J235 113 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 SPATA12Q7Z6I5 190 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 PRSS47A8MTI9 375 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 TNFRSF13BO14836 293 aaPredicted RBP10.51□□□□□ -0.73
GGA3-220ENST00000613421 TAX1BP3O14907 124 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 MYCNOSP40205 109 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 CARD19Q96LW7 228 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
GGA3-220ENST00000613421 A0A0J9YX75 114 aa10.5□□□□□ -0.73
GGA3-220ENST00000613421 COL5A1P20908 1838 aaPredicted RBP10.5□□□□□ -0.73
GGA3-220ENST00000613421 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
GGA3-220ENST00000613421 K7EQD1 137 aa10.5□□□□□ -0.73
GGA3-220ENST00000613421 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
GGA3-220ENST00000613421 C16orf74Q96GX8 76 aa10.5□□□□□ -0.73
GGA3-220ENST00000613421 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
GGA3-220ENST00000613421 IGF1P05019 195 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 TP53TG3Q9ULZ0 132 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 E9PLD3 99 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 CLPSL2Q6UWE3 100 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 PRORYQ9H606 182 aa10.49□□□□□ -0.73
GGA3-220ENST00000613421 SOCS3O14543 225 aa10.48□□□□□ -0.73
GGA3-220ENST00000613421 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
GGA3-220ENST00000613421 C4orf3Q8WVX3 66 aa10.48□□□□□ -0.73
GGA3-220ENST00000613421 DAZ2Q13117 558 aaKnown RBP10.47□□□□□ -0.73
GGA3-220ENST00000613421 DAZ4Q86SG3 579 aaKnown RBP10.47□□□□□ -0.73
GGA3-220ENST00000613421 ZFAND3Q9H8U3 227 aa10.47□□□□□ -0.73
GGA3-220ENST00000613421 DAZ3Q9NR90 486 aaKnown RBP10.47□□□□□ -0.73
GGA3-220ENST00000613421 IGHG4P01861 327 aa10.47□□□□□ -0.73
GGA3-220ENST00000613421 XCL1P47992 114 aa10.47□□□□□ -0.73
GGA3-220ENST00000613421 HERV-K104P63124 156 aa10.47□□□□□ -0.73
GGA3-220ENST00000613421 CPAMD8Q8IZJ3 1885 aa10.47□□□□□ -0.73
GGA3-220ENST00000613421 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
GGA3-220ENST00000613421 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
GGA3-220ENST00000613421 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 A4D1N5 150 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 MUSTN1Q8IVN3 82 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 DSCAMO60469 2012 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 A0A0J9YY99 117 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 IFITM1P13164 125 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 CRIP1P50238 77 aa10.46□□□□□ -0.73
GGA3-220ENST00000613421 PSCAO43653 123 aa10.46□□□□□ -0.74
GGA3-220ENST00000613421 PIEZO2Q9H5I5 2752 aa10.46□□□□□ -0.74
GGA3-220ENST00000613421 SMAD5-AS1Q9Y6J3 95 aa10.45□□□□□ -0.74
GGA3-220ENST00000613421 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
GGA3-220ENST00000613421 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
GGA3-220ENST00000613421 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
GGA3-220ENST00000613421 NACAE9PAV3 2078 aa10.44□□□□□ -0.74
GGA3-220ENST00000613421 TANC2Q9HCD6 1990 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms