RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 HIST2H2BDQ6DRA6 164 aa6.9□□□□□ -1.3
TTC28-208ENST00000612946 PRORYQ9H606 182 aa6.9□□□□□ -1.3
TTC28-208ENST00000612946 PFN2P35080 140 aa6.9□□□□□ -1.3
TTC28-208ENST00000612946 TRAV12-2A0A075B6T6 113 aa6.9□□□□□ -1.3
TTC28-208ENST00000612946 C15orf65H3BRN8 121 aa6.9□□□□□ -1.3
TTC28-208ENST00000612946 GATA3P23771 443 aa6.9□□□□□ -1.31
TTC28-208ENST00000612946 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.31
TTC28-208ENST00000612946 Q6JHZ5 121 aa6.9□□□□□ -1.31
TTC28-208ENST00000612946 SPRY4Q9C004 299 aa6.9□□□□□ -1.31
TTC28-208ENST00000612946 U3KQK5 164 aa6.9□□□□□ -1.31
TTC28-208ENST00000612946 LY6DQ14210 128 aa6.9□□□□□ -1.31
TTC28-208ENST00000612946 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 WT1-ASQ06250 92 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 FOXE3Q13461 319 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 IGHV3-73A0A0B4J1V6 119 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 TRAV4A0A0B4J268 109 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 C11orf1Q9H5F2 150 aa6.89□□□□□ -1.31
TTC28-208ENST00000612946 EFNA2O43921 213 aa6.88□□□□□ -1.31
TTC28-208ENST00000612946 TFF2Q03403 129 aa6.88□□□□□ -1.31
TTC28-208ENST00000612946 ZFHX2Q9C0A1 2572 aaPredicted RBP6.88□□□□□ -1.31
TTC28-208ENST00000612946 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
TTC28-208ENST00000612946 Q6ZSR3 168 aa6.88□□□□□ -1.31
TTC28-208ENST00000612946 FAM167A-AS1Q96KT0 104 aa6.88□□□□□ -1.31
TTC28-208ENST00000612946 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 DKK1O94907 266 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 LRP4O75096 1905 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 ZNF503Q96F45 646 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 TRAV23DV6A0A075B6W5 121 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 HTN3P15516 51 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 C9orf106Q8NAJ2 232 aa6.87□□□□□ -1.31
TTC28-208ENST00000612946 AGPAT4-IT1Q9H0P7 198 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 LINC00694P0DN24 101 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 CD24P25063 80 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 C7orf69Q9H7B7 122 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 COL4A1P02462 1669 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 LECT2O14960 151 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 IGHV7-4-1A0A0J9YVY3 117 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 BPY2O14599 106 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 CLEC2BQ92478 149 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 ACANP16112 2415 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 TEX22C9J3V5 150 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 H7C423 109 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 MSRB2Q9Y3D2 182 aa6.86□□□□□ -1.31
TTC28-208ENST00000612946 KAAG1Q9UBP8 84 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 XGP55808 180 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 A6NED7 52 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 PLA2G2EQ9NZK7 142 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 NDUFS5O43920 106 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 NSUN5P1Q3KNT7 163 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 F8P00451 2351 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 MUC7Q8TAX7 377 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 A0A0J9YX75 114 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 UBE2E1P51965 193 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 C2orf91Q6ZV80 131 aa6.85□□□□□ -1.31
TTC28-208ENST00000612946 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 PRR31Q5SQ13 230 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 LST1O00453 97 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 FAM19A5Q7Z5A7 132 aaPredicted RBP6.84□□□□□ -1.31
TTC28-208ENST00000612946 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 IGHV3-30-3P0DP02 117 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
TTC28-208ENST00000612946 KRTAP27-1Q3LI81 207 aa6.84□□□□□ -1.32
TTC28-208ENST00000612946 B3GALT5-AS1P59052 145 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 NDPQ00604 133 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 NDUFA1O15239 70 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 RS1O15537 224 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 E9PLN8 166 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 ABCA12Q86UK0 2595 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 PIP4P2Q8N4L2 257 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 IGHV3OR16-10A0A075B7F0 116 aa6.83□□□□□ -1.32
TTC28-208ENST00000612946 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 LYPD6Q86Y78 171 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 NRACQ8N912 160 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 PKD1L2Q7Z442 2459 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 FGF23Q9GZV9 251 aaPredicted RBP6.82□□□□□ -1.32
TTC28-208ENST00000612946 PRR19A6NJB7 356 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 MBD6Q96DN6 1003 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 ODF3Q96PU9 254 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 SPRR3Q9UBC9 169 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 PIEZO2Q9H5I5 2752 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 C17orf82Q86X59 251 aaPredicted RBP6.82□□□□□ -1.32
TTC28-208ENST00000612946 C3orf56Q8N813 242 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 TRBV7-3A0A075B6L6 115 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 WI2-2373I1.2A0A1W2PRP0 233 aa6.82□□□□□ -1.32
TTC28-208ENST00000612946 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms