RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 LST1O00453 97 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 C6orf106Q9H6K1 298 aaPredicted RBP3.57□□□□□ -1.84
HDDC2-208ENST00000609021 DMXL1Q9Y485 3027 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 PSPHP1O15172 72 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 IGKV1-39P01597 117 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 IGKV1D-39P04432 117 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 WFDC5Q8TCV5 224 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 CPAMD8Q8IZJ3 1885 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 FER1L5A0AVI2 2057 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 ZNF80P51504 273 aaPredicted RBP3.57□□□□□ -1.84
HDDC2-208ENST00000609021 MP68P56378 58 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 RP1P56715 2156 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 Q6ZS52 159 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 DOCK10Q96BY6 2186 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 ZNF524Q96C55 264 aa3.57□□□□□ -1.84
HDDC2-208ENST00000609021 GVINP1Q7Z2Y8 2422 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 CXorf51AA0A1B0GTR3 108 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 C12orf77C9JDV5 145 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 C10orf113Q5VZT2 155 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 LYPD5Q6UWN5 251 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 C16orf47Q6ZP98 133 aaPredicted RBP3.56□□□□□ -1.84
HDDC2-208ENST00000609021 SPATA3Q8NHX4 192 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 TMEM263Q8WUH6 116 aaKnown RBP3.56□□□□□ -1.84
HDDC2-208ENST00000609021 PSMG3-AS1Q96PY0 264 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 TRAV12-1A0A0B4J245 112 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 SOCS3O14543 225 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 MUSTN1Q8IVN3 82 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 RMI2Q96E14 147 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 UBE2D4Q9Y2X8 147 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 ARFGEF3Q5TH69 2177 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 TRAV21A0A0B4J279 112 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 M0R1W7 72 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 NNATQ16517 81 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 ATP5EP2Q5VTU8 51 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 Q8N2B8 174 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 SPRR3Q9UBC9 169 aa3.56□□□□□ -1.84
HDDC2-208ENST00000609021 IGKV1D-43A0A0B4J1Z2 117 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 KRTAP27-1Q3LI81 207 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 LYZL1Q6UWQ5 148 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 CCL17Q92583 94 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 ARHGAP32A7KAX9 2087 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 IGKV1D-42A0A075B6H8 117 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 LINC00473A8K010 186 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 TFF1P04155 84 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 MIFP14174 115 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 LINC00205P59089 165 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 TMEM30BQ3MIR4 351 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 OPRPNQ99935 248 aaPredicted RBP3.55□□□□□ -1.84
HDDC2-208ENST00000609021 A0A0C4DFX4 3053 aa3.55□□□□□ -1.84
HDDC2-208ENST00000609021 CXCL6P80162 114 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 C7orf65Q6ZTY9 151 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 OVOL2Q9BRP0 275 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 DCTN5Q9BTE1 182 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 LINC00588Q9Y4M8 146 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 PCSK5Q92824 1860 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 BCE1O60756 84 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 EGR2P11161 476 aaPredicted RBP3.54□□□□□ -1.84
HDDC2-208ENST00000609021 MSMPQ1L6U9 139 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 LINC00269Q8N2A0 174 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 CCL13Q99616 98 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 UBL5Q9BZL1 73 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 IGHV5-10-1A0A0J9YXX1 117 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 DEFB134Q4QY38 66 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 Q8N7P7 452 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 NRACQ8N912 160 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 CCL26Q9Y258 94 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 U3KQK5 164 aa3.54□□□□□ -1.84
HDDC2-208ENST00000609021 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 NTN3O00634 580 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-208ENST00000609021 HOXA4Q00056 320 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-208ENST00000609021 LINC00322Q6ZN03 302 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-208ENST00000609021 ATP11AUNQ6ZP68 121 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 Q8N6K4 173 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 ITLN1Q8WWA0 313 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 IMMP1LQ96LU5 166 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 PRR25Q96S07 402 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 CHD8Q9HCK8 2581 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 PIEZO1Q92508 2521 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 A0A1W2PNR3 127 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 E7EUB6 86 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 I3L3M4 83 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-208ENST00000609021 TNCP24821 2201 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 EP300Q09472 2414 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-208ENST00000609021 ENHOQ6UWT2 76 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 ITLN2Q8WWU7 325 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-208ENST00000609021 LOC400499M0QZD8 3231 aa3.53□□□□□ -1.84
HDDC2-208ENST00000609021 SMG1Q96Q15 3661 aaKnown RBP3.52□□□□□ -1.85
HDDC2-208ENST00000609021 LRCOL1A6NCL2 159 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 Q6ZS46 218 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 ZFHX3Q15911 3703 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 IGHV3-13P01766 116 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 RSPO4Q2I0M5 234 aaPredicted RBP3.52□□□□□ -1.85
HDDC2-208ENST00000609021 PHF5AQ7RTV0 110 aaKnown RBP3.52□□□□□ -1.85
HDDC2-208ENST00000609021 TMEM141Q96I45 108 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms