RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 BVES-AS1Q5T3Y7 98 aa8.53□□□□□ -1.04
SHANK2-219ENST00000606715 Q8N7P7 452 aa8.53□□□□□ -1.04
SHANK2-219ENST00000606715 VSIG2Q96IQ7 327 aa8.53□□□□□ -1.04
SHANK2-219ENST00000606715 LY6G6DO95868 133 aa8.52□□□□□ -1.05
SHANK2-219ENST00000606715 PRB2P02812 416 aaPredicted RBP8.52□□□□□ -1.05
SHANK2-219ENST00000606715 ETDBQ3ZM63 59 aa8.52□□□□□ -1.05
SHANK2-219ENST00000606715 CARD19Q96LW7 228 aa8.52□□□□□ -1.05
SHANK2-219ENST00000606715 ANKHD1Q8IWZ3 2542 aaKnown RBP8.52□□□□□ -1.05
SHANK2-219ENST00000606715 NPYP01303 97 aa8.52□□□□□ -1.05
SHANK2-219ENST00000606715 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
SHANK2-219ENST00000606715 IGLL1P15814 213 aa8.52□□□□□ -1.05
SHANK2-219ENST00000606715 C16orf54Q6UWD8 224 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 LINC00574Q9H8X3 128 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 ORMDL1Q9P0S3 153 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 K7EIM0 57 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 LMO4P61968 165 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 LTAP01374 205 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 DEFB131BA0A096LNP1 70 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 LY6G6CO95867 125 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 CRYBA4P53673 196 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 PRO0255Q9UI72 69 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 A6NDX4 124 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 CYYR1Q96J86 154 aa8.51□□□□□ -1.05
SHANK2-219ENST00000606715 COL4A3Q01955 1670 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 C19orf84I3L1E1 186 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
SHANK2-219ENST00000606715 C9orf118A6NHY6 69 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 A8MWP6 167 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 F8VRH5 84 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 ZNF726P1Q15940 193 aa8.5□□□□□ -1.05
SHANK2-219ENST00000606715 CTSGP08311 255 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 POLR3KQ9Y2Y1 108 aaPredicted RBP8.49□□□□□ -1.05
SHANK2-219ENST00000606715 TRBV7-3A0A075B6L6 115 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 K7EMI3 77 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 NCR3O14931 201 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 MSMPQ1L6U9 139 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 C18orf32Q8TCD1 76 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 CACNA1AO00555 2505 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 F8W1H4 67 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 FAM110AQ9BQ89 295 aa8.49□□□□□ -1.05
SHANK2-219ENST00000606715 WISP2O76076 250 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 KIR2DL5BQ8NHK3 375 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 PROP1O75360 226 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 IGKV1-17P01599 117 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 CRYGDP07320 174 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 MED13LQ71F56 2210 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 UBE2D1P51668 147 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 TMEM61Q8N0U2 210 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 SMIM27A0A1W2PRY6 76 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
SHANK2-219ENST00000606715 NOTCH3Q9UM47 2321 aa8.48□□□□□ -1.05
SHANK2-219ENST00000606715 HIVEP2P31629 2446 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 MUC22E2RYF6 1773 aaPredicted RBP8.47□□□□□ -1.05
SHANK2-219ENST00000606715 TRAV26-1A0A087WT03 109 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 Q8N1Y9 231 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 MED13Q9UHV7 2174 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 A0A087WZ39 114 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 CXCL5P42830 114 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 RITA1Q96K30 269 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 C20orf144Q9BQM9 153 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 V9GYV3 84 aa8.47□□□□□ -1.05
SHANK2-219ENST00000606715 NOTCH2Q04721 2471 aa8.46□□□□□ -1.05
SHANK2-219ENST00000606715 Q6YL49 198 aa8.46□□□□□ -1.05
SHANK2-219ENST00000606715 OPRPNQ99935 248 aaPredicted RBP8.46□□□□□ -1.05
SHANK2-219ENST00000606715 TEX22C9J3V5 150 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 WFDC9Q8NEX5 89 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 K7EP13 123 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 WI2-2373I1.2A0A1W2PRP0 233 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 C9JQL5 133 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 IGLC2P0DOY2 106 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 BAALCQ8WXS3 180 aa8.46□□□□□ -1.06
SHANK2-219ENST00000606715 H0Y9J4 135 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 H3BMG7 143 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 K7EP34 96 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 MAP6D1Q9H9H5 199 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 K7ERJ3 54 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 M0R2N4 97 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 CEND1Q8N111 149 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 HIGD2BQ4VC39 106 aa8.45□□□□□ -1.06
SHANK2-219ENST00000606715 ALPK3Q96L96 1907 aa8.44□□□□□ -1.06
SHANK2-219ENST00000606715 LGALS9BQ3B8N2 356 aa8.44□□□□□ -1.06
SHANK2-219ENST00000606715 LGALS9CQ6DKI2 356 aa8.44□□□□□ -1.06
SHANK2-219ENST00000606715 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
SHANK2-219ENST00000606715 MP68P56378 58 aa8.44□□□□□ -1.06
SHANK2-219ENST00000606715 C11orf71Q6IPW1 123 aa8.44□□□□□ -1.06
SHANK2-219ENST00000606715 HIGD2AQ9BW72 106 aa8.44□□□□□ -1.06
SHANK2-219ENST00000606715 SEC61GP60059 68 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms