RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 MAP1LC3AQ9H492 121 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 STAB1Q9NY15 2570 aa13.97□□□□□ -0.17
TUBB4B-202ENST00000604929 LINC00315P59091 139 aa13.97□□□□□ -0.17
TUBB4B-202ENST00000604929 GTSCR1Q86UQ5 136 aa13.97□□□□□ -0.17
TUBB4B-202ENST00000604929 F5H697 171 aa13.97□□□□□ -0.17
TUBB4B-202ENST00000604929 C20orf144Q9BQM9 153 aa13.97□□□□□ -0.17
TUBB4B-202ENST00000604929 C3orf56Q8N813 242 aa13.96□□□□□ -0.17
TUBB4B-202ENST00000604929 RPL39LQ96EH5 51 aaKnown RBP13.96□□□□□ -0.17
TUBB4B-202ENST00000604929 MRAP2Q96G30 205 aa13.96□□□□□ -0.17
TUBB4B-202ENST00000604929 LAMTOR2Q9Y2Q5 125 aa13.96□□□□□ -0.17
TUBB4B-202ENST00000604929 LINC00173Q6ZV60 143 aa13.95□□□□□ -0.18
TUBB4B-202ENST00000604929 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
TUBB4B-202ENST00000604929 WFDC9Q8NEX5 89 aa13.95□□□□□ -0.18
TUBB4B-202ENST00000604929 RASL10AQ92737 203 aa13.95□□□□□ -0.18
TUBB4B-202ENST00000604929 LEPROTL1O95214 131 aa13.94□□□□□ -0.18
TUBB4B-202ENST00000604929 C11orf72Q8NBR9 251 aa13.94□□□□□ -0.18
TUBB4B-202ENST00000604929 CRYGDP07320 174 aa13.93□□□□□ -0.18
TUBB4B-202ENST00000604929 ZNF415Q09FC8 603 aa13.93□□□□□ -0.18
TUBB4B-202ENST00000604929 ZNF747Q9BV97 191 aa13.93□□□□□ -0.18
TUBB4B-202ENST00000604929 LINC00467Q9BRT7 94 aa13.93□□□□□ -0.18
TUBB4B-202ENST00000604929 IGHV3-73A0A0B4J1V6 119 aa13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 M0R2P5 195 aa13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 SUMO4Q6EEV6 95 aa13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 MCRIP2Q9BUT9 160 aaKnown RBP13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 A0A096LNJ9 63 aa13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 ZNF56Q15929 161 aa13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 POM121L12Q8N7R1 296 aa13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 NXT2Q9NPJ8 142 aaKnown RBP13.91□□□□□ -0.18
TUBB4B-202ENST00000604929 TCAPO15273 167 aa13.9□□□□□ -0.18
TUBB4B-202ENST00000604929 Q8N8P6 123 aa13.9□□□□□ -0.18
TUBB4B-202ENST00000604929 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.18
TUBB4B-202ENST00000604929 COL6A5A8TX70 2615 aa13.9□□□□□ -0.18
TUBB4B-202ENST00000604929 IGLV2-18A0A075B6J9 118 aa13.9□□□□□ -0.18
TUBB4B-202ENST00000604929 CSNK1G2-AS1Q8NCQ2 148 aa13.9□□□□□ -0.18
TUBB4B-202ENST00000604929 SUMO2P61956 95 aaKnown RBP13.89□□□□□ -0.19
TUBB4B-202ENST00000604929 C12orf54Q6X4T0 127 aa13.89□□□□□ -0.19
TUBB4B-202ENST00000604929 DEFB104AQ8WTQ1 72 aa13.89□□□□□ -0.19
TUBB4B-202ENST00000604929 C1QTNF4Q9BXJ3 329 aa13.89□□□□□ -0.19
TUBB4B-202ENST00000604929 CSTL1Q9H114 145 aa13.89□□□□□ -0.19
TUBB4B-202ENST00000604929 GOLT1BQ9Y3E0 138 aa13.89□□□□□ -0.19
TUBB4B-202ENST00000604929 H0Y8G0 127 aa13.88□□□□□ -0.19
TUBB4B-202ENST00000604929 BTF3P20290 206 aaKnown RBP13.88□□□□□ -0.19
TUBB4B-202ENST00000604929 MORN3Q6PF18 240 aaPredicted RBP13.88□□□□□ -0.19
TUBB4B-202ENST00000604929 Q8N976 141 aa13.88□□□□□ -0.19
TUBB4B-202ENST00000604929 PRSS47A8MTI9 375 aa13.88□□□□□ -0.19
TUBB4B-202ENST00000604929 RNASE8Q8TDE3 154 aaKnown RBP13.87□□□□□ -0.19
TUBB4B-202ENST00000604929 SPXQ9BT56 116 aa13.87□□□□□ -0.19
TUBB4B-202ENST00000604929 NBEAL2Q6ZNJ1 2754 aa13.87□□□□□ -0.19
TUBB4B-202ENST00000604929 S100A12P80511 92 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 OXLD1Q5BKU9 147 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 NEGR1Q7Z3B1 354 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 SPATA12Q7Z6I5 190 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 SMIM2Q9BVW6 85 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 PKD1L1Q8TDX9 2849 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 HBDP02042 147 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 SHISA2Q6UWI4 295 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 C20orf78Q9BR46 151 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 TMEM70Q9BUB7 260 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 HSPB8Q9UJY1 196 aa13.86□□□□□ -0.19
TUBB4B-202ENST00000604929 M0QY20 66 aa13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 TMEM263Q8WUH6 116 aaKnown RBP13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 TRGV1A0A0A0MS02 117 aa13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 LINC01546A6NGU7 62 aa13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 A8MWV9 139 aa13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 CFAP126Q5VTH2 177 aa13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 ST20Q9HBF5 79 aa13.85□□□□□ -0.19
TUBB4B-202ENST00000604929 SYS1-DBNDD2H3BUS1 97 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 PPP1R17O96001 155 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 LAGE3Q14657 143 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 ATOH7Q8N100 152 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 MAP1LC3CQ9BXW4 147 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 PRO1933Q9H354 126 aa13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 NOP10Q9NPE3 64 aaKnown RBP13.84□□□□□ -0.19
TUBB4B-202ENST00000604929 FCER1GP30273 86 aa13.83□□□□□ -0.2
TUBB4B-202ENST00000604929 ZNF705AQ6ZN79 300 aaPredicted RBP13.83□□□□□ -0.2
TUBB4B-202ENST00000604929 ZNF664Q8N3J9 261 aa13.83□□□□□ -0.2
TUBB4B-202ENST00000604929 C18orf15Q96N68 181 aa13.83□□□□□ -0.2
TUBB4B-202ENST00000604929 P0DMU3 169 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 FAM231AP0DMU4 169 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 FAM231CP0DMU5 169 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 RRN3P1Q2M238 152 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 Q6ZSN1 163 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 Q6ZTI0 123 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 PTH2Q96A98 100 aa13.82□□□□□ -0.2
TUBB4B-202ENST00000604929 UFSP1Q6NVU6 142 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 IL17DQ8TAD2 202 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 NACAE9PAV3 2078 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 SDHAF1A6NFY7 115 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 NUDT3O95989 172 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 EMP1P54849 157 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 PIK3CD-AS1Q5SR53 167 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 PMCHL2Q9BQD1 86 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 Q9UF83 564 aa13.81□□□□□ -0.2
TUBB4B-202ENST00000604929 PLAC8L1A1L4L8 177 aa13.8□□□□□ -0.2
TUBB4B-202ENST00000604929 WIPF1O43516 503 aa13.8□□□□□ -0.2
TUBB4B-202ENST00000604929 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
TUBB4B-202ENST00000604929 TEX43Q6ZNM6 134 aa13.8□□□□□ -0.2
TUBB4B-202ENST00000604929 C16orf74Q96GX8 76 aa13.8□□□□□ -0.2
TUBB4B-202ENST00000604929 PAM16Q9Y3D7 125 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms