RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 BIN3Q9NQY0 253 aa11.42□□□□□ -0.58
SSBP4-213ENST00000602088 PKD1P98161 4303 aa11.41□□□□□ -0.58
SSBP4-213ENST00000602088 WFDC10BQ8IUB3 73 aa11.41□□□□□ -0.58
SSBP4-213ENST00000602088 C14orf178Q8N769 122 aaPredicted RBP11.41□□□□□ -0.58
SSBP4-213ENST00000602088 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
SSBP4-213ENST00000602088 Q9UF83 564 aa11.41□□□□□ -0.58
SSBP4-213ENST00000602088 P01737 135 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 GZMBP10144 247 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 BTF3P20290 206 aaKnown RBP11.4□□□□□ -0.58
SSBP4-213ENST00000602088 RPS20P60866 119 aaKnown RBP11.4□□□□□ -0.58
SSBP4-213ENST00000602088 TOR2AQ5JU69 321 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 SPANXN1Q5VSR9 72 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 OCC1Q8TAD7 63 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 FAM210AQ96ND0 272 aa11.4□□□□□ -0.58
SSBP4-213ENST00000602088 MUC21A0A0G2JKD1 596 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 MUC21A0A140T8X8 626 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 GAGE12JA6NER3 117 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
SSBP4-213ENST00000602088 IGLC6P0CF74 106 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 LINC00694P0DN24 101 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 GAGE1Q13065 139 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 GAGE4Q13068 117 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 GAGE5Q13069 117 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 GAGE13Q4V321 117 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 EIF5A2Q9GZV4 153 aaKnown RBP11.39□□□□□ -0.59
SSBP4-213ENST00000602088 LY96Q9Y6Y9 160 aa11.39□□□□□ -0.59
SSBP4-213ENST00000602088 K7EN84 100 aa11.38□□□□□ -0.59
SSBP4-213ENST00000602088 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
SSBP4-213ENST00000602088 TNP2Q05952 138 aa11.38□□□□□ -0.59
SSBP4-213ENST00000602088 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
SSBP4-213ENST00000602088 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
SSBP4-213ENST00000602088 GTSF1LQ9H1H1 148 aa11.38□□□□□ -0.59
SSBP4-213ENST00000602088 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
SSBP4-213ENST00000602088 XKRY2A2RUG3 117 aa11.37□□□□□ -0.59
SSBP4-213ENST00000602088 K7EP13 123 aa11.37□□□□□ -0.59
SSBP4-213ENST00000602088 SSTP61278 116 aa11.37□□□□□ -0.59
SSBP4-213ENST00000602088 EVI2AP22794 236 aa11.36□□□□□ -0.59
SSBP4-213ENST00000602088 CEBPGP53567 150 aa11.36□□□□□ -0.59
SSBP4-213ENST00000602088 LINC00315P59091 139 aa11.36□□□□□ -0.59
SSBP4-213ENST00000602088 LELP1Q5T871 98 aa11.36□□□□□ -0.59
SSBP4-213ENST00000602088 TPPP3Q9BW30 176 aa11.36□□□□□ -0.59
SSBP4-213ENST00000602088 TRAV8-6A0A0B4J262 113 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 IGHV3-38A0A0C4DH36 116 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 TRBV10-1A0A0K0K1A3 114 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 F2Z2F3 143 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 RAB4BP61018 213 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 OR10J3Q5JRS4 329 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 RNASE7Q9H1E1 156 aaKnown RBP11.35□□□□□ -0.59
SSBP4-213ENST00000602088 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
SSBP4-213ENST00000602088 SRP19P09132 144 aaKnown RBP11.34□□□□□ -0.59
SSBP4-213ENST00000602088 ZNF56Q15929 161 aa11.34□□□□□ -0.59
SSBP4-213ENST00000602088 LYZL1Q6UWQ5 148 aa11.34□□□□□ -0.59
SSBP4-213ENST00000602088 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
SSBP4-213ENST00000602088 RPP21Q9H633 154 aaKnown RBP11.34□□□□□ -0.59
SSBP4-213ENST00000602088 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
SSBP4-213ENST00000602088 TNFRSF18Q9Y5U5 241 aa11.34□□□□□ -0.59
SSBP4-213ENST00000602088 CACNG7P62955 275 aa11.33□□□□□ -0.6
SSBP4-213ENST00000602088 LINC01556Q5JQF7 62 aa11.33□□□□□ -0.6
SSBP4-213ENST00000602088 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
SSBP4-213ENST00000602088 SMIM7Q9BQ49 75 aa11.33□□□□□ -0.6
SSBP4-213ENST00000602088 A0A087WWC5 75 aa11.32□□□□□ -0.6
SSBP4-213ENST00000602088 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
SSBP4-213ENST00000602088 RPL36AP83881 106 aaKnown RBP11.32□□□□□ -0.6
SSBP4-213ENST00000602088 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
SSBP4-213ENST00000602088 RPL36ALQ969Q0 106 aaKnown RBP11.32□□□□□ -0.6
SSBP4-213ENST00000602088 DNAH11Q96DT5 4516 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 TRBV7-3A0A075B6L6 115 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 F5H697 171 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 NTF3P20783 257 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 CTRLP40313 264 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 WDR73Q6P4I2 378 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 OR10G8Q8NGN5 311 aa11.31□□□□□ -0.6
SSBP4-213ENST00000602088 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 GATCO43716 136 aaKnown RBP11.3□□□□□ -0.6
SSBP4-213ENST00000602088 UBE2D3P61077 147 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 UBE2D2P62837 147 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 NFE4Q86UQ8 179 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
SSBP4-213ENST00000602088 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
SSBP4-213ENST00000602088 C9JQL5 133 aa11.28□□□□□ -0.6
SSBP4-213ENST00000602088 TRGC1P0CF51 173 aa11.28□□□□□ -0.6
SSBP4-213ENST00000602088 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
SSBP4-213ENST00000602088 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
SSBP4-213ENST00000602088 A8MWL6 223 aa11.27□□□□□ -0.61
SSBP4-213ENST00000602088 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
SSBP4-213ENST00000602088 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
SSBP4-213ENST00000602088 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
SSBP4-213ENST00000602088 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
SSBP4-213ENST00000602088 SRSF3P84103 164 aaKnown RBP11.27□□□□□ -0.61
SSBP4-213ENST00000602088 DYNC1H1Q14204 4646 aaKnown RBP11.26□□□□□ -0.61
SSBP4-213ENST00000602088 M0QY20 66 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 MGPP08493 103 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 PEA15Q15121 130 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms