RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TPPP3Q9BW30 176 aa13.8□□□□□ -0.2
SSBP4-210ENST00000601444 Q9H8V8 135 aa13.8□□□□□ -0.2
SSBP4-210ENST00000601444 RPS20P60866 119 aaKnown RBP13.79□□□□□ -0.2
SSBP4-210ENST00000601444 RHOHQ15669 191 aa13.79□□□□□ -0.2
SSBP4-210ENST00000601444 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
SSBP4-210ENST00000601444 FER1L6-AS1Q8NA97 138 aa13.79□□□□□ -0.2
SSBP4-210ENST00000601444 PRADC1Q9BSG0 188 aa13.79□□□□□ -0.2
SSBP4-210ENST00000601444 UPK3BQ9BT76 320 aa13.79□□□□□ -0.2
SSBP4-210ENST00000601444 ZNF727A8MUV8 499 aa13.78□□□□□ -0.2
SSBP4-210ENST00000601444 RPP21Q9H633 154 aaKnown RBP13.77□□□□□ -0.21
SSBP4-210ENST00000601444 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
SSBP4-210ENST00000601444 NBDYA0A0U1RRE5 68 aa13.76□□□□□ -0.21
SSBP4-210ENST00000601444 RHODO00212 210 aa13.76□□□□□ -0.21
SSBP4-210ENST00000601444 LYZL1Q6UWQ5 148 aa13.76□□□□□ -0.21
SSBP4-210ENST00000601444 LINC01551Q86U37 167 aa13.76□□□□□ -0.21
SSBP4-210ENST00000601444 LY96Q9Y6Y9 160 aa13.76□□□□□ -0.21
SSBP4-210ENST00000601444 FRAS1Q86XX4 4008 aa13.76□□□□□ -0.21
SSBP4-210ENST00000601444 XKRY2A2RUG3 117 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 GAGE12JA6NER3 117 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 IFITM2Q01629 132 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 GAGE1Q13065 139 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 GAGE4Q13068 117 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 GAGE5Q13069 117 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 PEA15Q15121 130 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 GAGE13Q4V321 117 aa13.75□□□□□ -0.21
SSBP4-210ENST00000601444 EPPK1P58107 5090 aaKnown RBP13.74□□□□□ -0.21
SSBP4-210ENST00000601444 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
SSBP4-210ENST00000601444 FAM231DQ6ZW35 169 aa13.74□□□□□ -0.21
SSBP4-210ENST00000601444 KRTAP1-5Q9BYS1 174 aa13.74□□□□□ -0.21
SSBP4-210ENST00000601444 GATCO43716 136 aaKnown RBP13.73□□□□□ -0.21
SSBP4-210ENST00000601444 GTSF1Q8WW33 167 aa13.73□□□□□ -0.21
SSBP4-210ENST00000601444 KIF25-AS1Q9Y6Z4 181 aa13.73□□□□□ -0.21
SSBP4-210ENST00000601444 RTL8CO15255 209 aa13.72□□□□□ -0.21
SSBP4-210ENST00000601444 LINC00694P0DN24 101 aa13.72□□□□□ -0.21
SSBP4-210ENST00000601444 RAB14P61106 215 aa13.72□□□□□ -0.21
SSBP4-210ENST00000601444 SH2D6Q7Z4S9 175 aa13.72□□□□□ -0.21
SSBP4-210ENST00000601444 WFDC10BQ8IUB3 73 aa13.72□□□□□ -0.21
SSBP4-210ENST00000601444 A0A1W2PPQ1 181 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 F2Z2F3 143 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 SIVA1O15304 175 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 NTF3P20783 257 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 CTRLP40313 264 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 LINC00315P59091 139 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 CACNG7P62955 275 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 ZNF56Q15929 161 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 TMEM241Q24JQ0 296 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 ATP6V0E2Q8NHE4 81 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 SMDT1Q9H4I9 107 aa13.71□□□□□ -0.21
SSBP4-210ENST00000601444 RAB4BP61018 213 aa13.7□□□□□ -0.22
SSBP4-210ENST00000601444 RPL23P62829 140 aaKnown RBP13.7□□□□□ -0.22
SSBP4-210ENST00000601444 FAM74A3Q4VXF1 159 aa13.7□□□□□ -0.22
SSBP4-210ENST00000601444 AP1S3Q96PC3 154 aa13.7□□□□□ -0.22
SSBP4-210ENST00000601444 DNAH17Q9UFH2 4485 aa13.7□□□□□ -0.22
SSBP4-210ENST00000601444 FAT2Q9NYQ8 4349 aa13.69□□□□□ -0.22
SSBP4-210ENST00000601444 F5H697 171 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 SMIM17P0DL12 118 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 EVI2AP22794 236 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 TIRAPP58753 221 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 CLLU1Q5K131 121 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 C1orf134Q5TEV5 83 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 ISOC2Q96AB3 205 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 OSTCQ9NRP0 149 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 NAT8Q9UHE5 227 aa13.68□□□□□ -0.22
SSBP4-210ENST00000601444 A8MWL6 223 aa13.67□□□□□ -0.22
SSBP4-210ENST00000601444 ADIRFQ15847 76 aa13.67□□□□□ -0.22
SSBP4-210ENST00000601444 SOHLH1Q5JUK2 328 aa13.67□□□□□ -0.22
SSBP4-210ENST00000601444 PGLYRP4Q96LB8 373 aa13.67□□□□□ -0.22
SSBP4-210ENST00000601444 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
SSBP4-210ENST00000601444 MGPP08493 103 aa13.66□□□□□ -0.22
SSBP4-210ENST00000601444 TWIST1Q15672 202 aa13.66□□□□□ -0.22
SSBP4-210ENST00000601444 CT83Q5H943 113 aa13.66□□□□□ -0.22
SSBP4-210ENST00000601444 WDR73Q6P4I2 378 aa13.66□□□□□ -0.22
SSBP4-210ENST00000601444 TRBV10-1A0A0K0K1A3 114 aa13.65□□□□□ -0.22
SSBP4-210ENST00000601444 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
SSBP4-210ENST00000601444 C6orf223Q8N319 242 aa13.65□□□□□ -0.22
SSBP4-210ENST00000601444 NEXN-AS1Q8NBZ9 246 aa13.65□□□□□ -0.22
SSBP4-210ENST00000601444 V9GYV3 84 aa13.65□□□□□ -0.22
SSBP4-210ENST00000601444 OR10J3Q5JRS4 329 aa13.64□□□□□ -0.23
SSBP4-210ENST00000601444 LELP1Q5T871 98 aa13.64□□□□□ -0.23
SSBP4-210ENST00000601444 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
SSBP4-210ENST00000601444 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 PRSS29PA6NIE9 313 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 TRGC1P0CF51 173 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 DNAH10OSP0CZ25 163 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 FOXA3P55318 350 aaPredicted RBP13.63□□□□□ -0.23
SSBP4-210ENST00000601444 UBE2D3P61077 147 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 UBE2D2P62837 147 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 RPL36AP83881 106 aaKnown RBP13.63□□□□□ -0.23
SSBP4-210ENST00000601444 LINC00336Q6ZUF6 198 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 C15orf54Q8N8G6 183 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 RPL36ALQ969Q0 106 aaKnown RBP13.63□□□□□ -0.23
SSBP4-210ENST00000601444 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
SSBP4-210ENST00000601444 HIGD1CA8MV81 97 aa13.62□□□□□ -0.23
SSBP4-210ENST00000601444 SUMO4Q6EEV6 95 aa13.62□□□□□ -0.23
SSBP4-210ENST00000601444 TRAV8-6A0A0B4J262 113 aa13.61□□□□□ -0.23
SSBP4-210ENST00000601444 IGHV3-38A0A0C4DH36 116 aa13.61□□□□□ -0.23
SSBP4-210ENST00000601444 M0QY20 66 aa13.61□□□□□ -0.23
SSBP4-210ENST00000601444 DPH3P1Q9H4G8 78 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms