RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MORN3Q6PF18 240 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-224ENST00000600718 NIT1Q86X76 327 aa12.91□□□□□ -0.34
SHKBP1-224ENST00000600718 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
SHKBP1-224ENST00000600718 LINC01587Q99440 93 aa12.91□□□□□ -0.34
SHKBP1-224ENST00000600718 PMCHP20382 165 aa12.9□□□□□ -0.34
SHKBP1-224ENST00000600718 PMCHL1Q16048 86 aa12.9□□□□□ -0.34
SHKBP1-224ENST00000600718 DEFB125Q8N687 156 aa12.9□□□□□ -0.34
SHKBP1-224ENST00000600718 C9orf85Q96MD7 179 aa12.9□□□□□ -0.34
SHKBP1-224ENST00000600718 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
SHKBP1-224ENST00000600718 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
SHKBP1-224ENST00000600718 M0R381 172 aa12.89□□□□□ -0.35
SHKBP1-224ENST00000600718 NXPH4O95158 308 aa12.89□□□□□ -0.35
SHKBP1-224ENST00000600718 RPL35AP18077 110 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-224ENST00000600718 C1QTNF4Q9BXJ3 329 aa12.89□□□□□ -0.35
SHKBP1-224ENST00000600718 TENM1Q9UKZ4 2725 aa12.89□□□□□ -0.35
SHKBP1-224ENST00000600718 SPRY2O43597 315 aa12.88□□□□□ -0.35
SHKBP1-224ENST00000600718 EVI2AP22794 236 aa12.88□□□□□ -0.35
SHKBP1-224ENST00000600718 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-224ENST00000600718 U3KQK5 164 aa12.88□□□□□ -0.35
SHKBP1-224ENST00000600718 ATRQ13535 2644 aa12.88□□□□□ -0.35
SHKBP1-224ENST00000600718 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 HTN1P15515 57 aa12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 PTTG1IPP53801 180 aa12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 C1orf158Q8N1D5 194 aa12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 RNF185Q96GF1 192 aa12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 SYT8Q8NBV8 401 aa12.87□□□□□ -0.35
SHKBP1-224ENST00000600718 FBN1P35555 2871 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-224ENST00000600718 K7EP13 123 aa12.86□□□□□ -0.35
SHKBP1-224ENST00000600718 CCL25O15444 150 aa12.86□□□□□ -0.35
SHKBP1-224ENST00000600718 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
SHKBP1-224ENST00000600718 COX11Q9Y6N1 276 aa12.86□□□□□ -0.35
SHKBP1-224ENST00000600718 PPBPP02775 128 aa12.85□□□□□ -0.35
SHKBP1-224ENST00000600718 ORMDL3Q8N138 153 aa12.85□□□□□ -0.35
SHKBP1-224ENST00000600718 CKS2P33552 79 aa12.85□□□□□ -0.35
SHKBP1-224ENST00000600718 ZNF415Q09FC8 603 aa12.85□□□□□ -0.35
SHKBP1-224ENST00000600718 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
SHKBP1-224ENST00000600718 TRAV9-2A0A087WT02 112 aa12.84□□□□□ -0.35
SHKBP1-224ENST00000600718 D6R8Y8 96 aa12.84□□□□□ -0.35
SHKBP1-224ENST00000600718 RBX1P62877 108 aa12.84□□□□□ -0.35
SHKBP1-224ENST00000600718 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
SHKBP1-224ENST00000600718 DPH3P1Q9H4G8 78 aa12.84□□□□□ -0.35
SHKBP1-224ENST00000600718 FAM19A2Q8N3H0 131 aa12.83□□□□□ -0.35
SHKBP1-224ENST00000600718 PRELID3AQ96N28 172 aa12.83□□□□□ -0.35
SHKBP1-224ENST00000600718 IGHV3OR16-12A0A075B7B8 117 aa12.83□□□□□ -0.36
SHKBP1-224ENST00000600718 PRM2P04554 102 aa12.83□□□□□ -0.36
SHKBP1-224ENST00000600718 C14orf178Q8N769 122 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-224ENST00000600718 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
SHKBP1-224ENST00000600718 PTH2Q96A98 100 aa12.83□□□□□ -0.36
SHKBP1-224ENST00000600718 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
SHKBP1-224ENST00000600718 SPXQ9BT56 116 aa12.82□□□□□ -0.36
SHKBP1-224ENST00000600718 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 HINT1P49773 126 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 OXLD1Q5BKU9 147 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 C11orf72Q8NBR9 251 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 MAST4O15021 2626 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 M0R2P5 195 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 HSBP1O75506 76 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 ZNF876PQ49A33 203 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 PIK3CD-AS1Q5SR53 167 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 MRAP2Q96G30 205 aa12.81□□□□□ -0.36
SHKBP1-224ENST00000600718 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
SHKBP1-224ENST00000600718 AZU1P20160 251 aa12.8□□□□□ -0.36
SHKBP1-224ENST00000600718 KIF25-AS1Q9Y6Z4 181 aa12.8□□□□□ -0.36
SHKBP1-224ENST00000600718 POM121L12Q8N7R1 296 aa12.8□□□□□ -0.36
SHKBP1-224ENST00000600718 NCR2O95944 276 aa12.79□□□□□ -0.36
SHKBP1-224ENST00000600718 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
SHKBP1-224ENST00000600718 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
SHKBP1-224ENST00000600718 MUC4Q99102 2169 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 EGFEM1PQ0D2K5 195 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 MAJINQ3KP22 176 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 TMEM263Q8WUH6 116 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 JPT2Q9H910 190 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 VWFP04275 2813 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 NPYP01303 97 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 MGPP08493 103 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 LINC00315P59091 139 aa12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 CHCHD1Q96BP2 118 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-224ENST00000600718 TNFRSF6BO95407 300 aa12.77□□□□□ -0.37
SHKBP1-224ENST00000600718 APOC4P55056 127 aa12.77□□□□□ -0.37
SHKBP1-224ENST00000600718 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-224ENST00000600718 GAS8-AS1O95177 125 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 PRSS3P2Q8NHM4 247 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 A0A087WWL8 130 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 CRYGDP07320 174 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 KRTAP10-11P60412 298 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 C16orf74Q96GX8 76 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
SHKBP1-224ENST00000600718 A8MWV9 139 aa12.75□□□□□ -0.37
SHKBP1-224ENST00000600718 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-224ENST00000600718 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
SHKBP1-224ENST00000600718 NRACQ8N912 160 aa12.75□□□□□ -0.37
SHKBP1-224ENST00000600718 OR4C5Q8NGB2 326 aa12.75□□□□□ -0.37
SHKBP1-224ENST00000600718 TMEM70Q9BUB7 260 aa12.75□□□□□ -0.37
SHKBP1-224ENST00000600718 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
SHKBP1-224ENST00000600718 PPP1R17O96001 155 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms