RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TWIST1Q15672 202 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 ANXA2RQ3ZCQ2 193 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 ZNF705AQ6ZN79 300 aaPredicted RBP9.71□□□□□ -0.86
IRF3-225ENST00000600022 Q6ZR54 194 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 TRGV11A0A075B6L2 103 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BKO60814 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BJP06899 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BOP23527 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BBP33778 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BDP58876 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BCP62807 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST2H2BEQ16778 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.7□□□□□ -0.86
IRF3-225ENST00000600022 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BHQ93079 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BNQ99877 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 HIST1H2BMQ99879 126 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
IRF3-225ENST00000600022 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
IRF3-225ENST00000600022 H3BVH4 76 aa9.69□□□□□ -0.86
IRF3-225ENST00000600022 PRM2P04554 102 aa9.69□□□□□ -0.86
IRF3-225ENST00000600022 NDUFA6P56556 154 aa9.69□□□□□ -0.86
IRF3-225ENST00000600022 KIR3DS1Q14943 382 aa9.69□□□□□ -0.86
IRF3-225ENST00000600022 C1QTNF4Q9BXJ3 329 aa9.69□□□□□ -0.86
IRF3-225ENST00000600022 TIMM8BQ9Y5J9 83 aaPredicted RBP9.69□□□□□ -0.86
IRF3-225ENST00000600022 CRXO43186 299 aaPredicted RBP9.68□□□□□ -0.86
IRF3-225ENST00000600022 ZNF324O75467 553 aaPredicted RBP9.68□□□□□ -0.86
IRF3-225ENST00000600022 SPART-AS1P0CW21 52 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 SSTP61278 116 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 TDRG1Q3Y452 100 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 DNLZQ5SXM8 178 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 DKK2Q9UBU2 259 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
IRF3-225ENST00000600022 CBY3A6NI87 242 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 SNAI2O43623 268 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 HTN3P15516 51 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 NTF3P20783 257 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 C1orf158Q8N1D5 194 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 TMEM256Q8N2U0 113 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
IRF3-225ENST00000600022 SSBP4Q9BWG4 385 aaPredicted RBP9.67□□□□□ -0.86
IRF3-225ENST00000600022 PHOX2AO14813 284 aa9.66□□□□□ -0.86
IRF3-225ENST00000600022 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
IRF3-225ENST00000600022 UBE2DNLQ8IWF7 75 aa9.66□□□□□ -0.86
IRF3-225ENST00000600022 LINC01587Q99440 93 aa9.66□□□□□ -0.86
IRF3-225ENST00000600022 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
IRF3-225ENST00000600022 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 GNRH2O43555 120 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 S100A2P29034 98 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 SNRPEP62304 92 aaKnown RBP9.65□□□□□ -0.86
IRF3-225ENST00000600022 SLAQ13239 276 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 Q6ZQT7 251 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 GOLT1BQ9Y3E0 138 aa9.65□□□□□ -0.86
IRF3-225ENST00000600022 NACAE9PAV3 2078 aa9.65□□□□□ -0.87
IRF3-225ENST00000600022 M0R381 172 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 SRIP30626 198 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 AP1S3Q96PC3 154 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
IRF3-225ENST00000600022 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 SMIM9A6NGZ8 99 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 HTN1P15515 57 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 TNP2Q05952 138 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 Q0VG73 95 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 SCRT2Q9NQ03 307 aa9.63□□□□□ -0.87
IRF3-225ENST00000600022 APOBP04114 4563 aaKnown RBP9.62□□□□□ -0.87
IRF3-225ENST00000600022 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
IRF3-225ENST00000600022 PPBPP02775 128 aa9.62□□□□□ -0.87
IRF3-225ENST00000600022 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
IRF3-225ENST00000600022 HOXA5P20719 270 aa9.61□□□□□ -0.87
IRF3-225ENST00000600022 CKS2P33552 79 aa9.61□□□□□ -0.87
IRF3-225ENST00000600022 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
IRF3-225ENST00000600022 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
IRF3-225ENST00000600022 AMN1Q8IY45 258 aa9.61□□□□□ -0.87
IRF3-225ENST00000600022 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
IRF3-225ENST00000600022 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
IRF3-225ENST00000600022 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
IRF3-225ENST00000600022 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
IRF3-225ENST00000600022 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
IRF3-225ENST00000600022 SPXQ9BT56 116 aa9.6□□□□□ -0.87
IRF3-225ENST00000600022 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
IRF3-225ENST00000600022 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
IRF3-225ENST00000600022 NXPH4O95158 308 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms