RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 A0A087WWL8 130 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 K7EP13 123 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 M0R381 172 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 S100A9P06702 114 aaKnown RBP8.15□□□□□ -1.1
LIG1-217ENST00000599165 EVI2AP22794 236 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.1
LIG1-217ENST00000599165 C9orf62Q8N4C0 152 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 OR10AG1Q8NH19 301 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 SSBP4Q9BWG4 385 aaPredicted RBP8.15□□□□□ -1.1
LIG1-217ENST00000599165 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
LIG1-217ENST00000599165 TRAV9-2A0A087WT02 112 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 IBA57-AS1B1ANH7 110 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 SNAI2O43623 268 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 CXCL1P09341 107 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 RAB5CP51148 216 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 SYT8Q8NBV8 401 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 MANBALQ9NQG1 85 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
LIG1-217ENST00000599165 TRBV20OR9-2A0A075B6H5 130 aa8.13□□□□□ -1.11
LIG1-217ENST00000599165 LRCOL1A6NCL2 159 aa8.13□□□□□ -1.11
LIG1-217ENST00000599165 RHODO00212 210 aa8.13□□□□□ -1.11
LIG1-217ENST00000599165 OR10J3Q5JRS4 329 aa8.13□□□□□ -1.11
LIG1-217ENST00000599165 FAM74A4Q5TZK3 123 aa8.13□□□□□ -1.11
LIG1-217ENST00000599165 SLC51BQ86UW2 128 aa8.13□□□□□ -1.11
LIG1-217ENST00000599165 TRAV8-6A0A0B4J262 113 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 MUC21A0A0G2JKD1 596 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 MUC21A0A140T8X8 626 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 RAB19A4D1S5 217 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 IGHV3-30P01768 117 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 IGHV3-33P01772 117 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 IGHV3-30-3P0DP02 117 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 IGHV3-30-5P0DP03 117 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 ERVFC1-1P60608 527 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 CENPWQ5EE01 88 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 PRR27Q6MZM9 219 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 ZFP82Q8N141 532 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 C10orf126Q8N4M7 172 aa8.12□□□□□ -1.11
LIG1-217ENST00000599165 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
LIG1-217ENST00000599165 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
LIG1-217ENST00000599165 OR5AL1P0C617 328 aa8.11□□□□□ -1.11
LIG1-217ENST00000599165 EIF5AL1Q6IS14 154 aaKnown RBP8.11□□□□□ -1.11
LIG1-217ENST00000599165 KIF25-AS1Q9Y6Z4 181 aa8.11□□□□□ -1.11
LIG1-217ENST00000599165 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
LIG1-217ENST00000599165 GZMBP10144 247 aa8.1□□□□□ -1.11
LIG1-217ENST00000599165 BCL2P10415 239 aa8.1□□□□□ -1.11
LIG1-217ENST00000599165 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
LIG1-217ENST00000599165 MEF2BQ02080 365 aaPredicted RBP8.1□□□□□ -1.11
LIG1-217ENST00000599165 AKAP14Q86UN6 197 aa8.1□□□□□ -1.11
LIG1-217ENST00000599165 DNAJC30Q96LL9 226 aa8.1□□□□□ -1.11
LIG1-217ENST00000599165 UBE2D3P61077 147 aa8.09□□□□□ -1.11
LIG1-217ENST00000599165 UBE2D2P62837 147 aa8.09□□□□□ -1.11
LIG1-217ENST00000599165 WFDC2Q14508 124 aa8.09□□□□□ -1.11
LIG1-217ENST00000599165 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
LIG1-217ENST00000599165 OR10G8Q8NGN5 311 aa8.09□□□□□ -1.11
LIG1-217ENST00000599165 Q9HAA7 133 aa8.09□□□□□ -1.11
LIG1-217ENST00000599165 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
LIG1-217ENST00000599165 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
LIG1-217ENST00000599165 TRBV10-1A0A0K0K1A3 114 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 XGP55808 180 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 LAGE3Q14657 143 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 NIT1Q86X76 327 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 MAPKAPK5-AS1Q8N8E1 139 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 NEXN-AS1Q8NBZ9 246 aa8.08□□□□□ -1.12
LIG1-217ENST00000599165 PDE6DO43924 150 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 RAB4BP61018 213 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 ALKAL2Q6UX46 152 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 LYPD6BQ8NI32 183 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 SMIM12Q96EX1 92 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 MED9Q9NWA0 146 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 VAX2Q9UIW0 290 aa8.07□□□□□ -1.12
LIG1-217ENST00000599165 TRBV7-3A0A075B6L6 115 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 A0A087WWC5 75 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 TEX46H3BTG2 121 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 K7EN84 100 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 GNG4P50150 75 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 SSTP61278 116 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 Q8N1X5 172 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 OR2D3Q8NGH3 330 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
LIG1-217ENST00000599165 EREGO14944 169 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 IFNA1P01562 189 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 NKX2-5P52952 324 aaPredicted RBP8.05□□□□□ -1.12
LIG1-217ENST00000599165 RPL36AP83881 106 aaKnown RBP8.05□□□□□ -1.12
LIG1-217ENST00000599165 ZNF56Q15929 161 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 SPANXN1Q5VSR9 72 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 NTM-AS1Q6ZSK4 140 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 Q8N814 137 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
LIG1-217ENST00000599165 RPL36ALQ969Q0 106 aaKnown RBP8.05□□□□□ -1.12
LIG1-217ENST00000599165 NUDT10Q8NFP7 164 aa8.04□□□□□ -1.12
LIG1-217ENST00000599165 NUDT11Q96G61 164 aa8.04□□□□□ -1.12
LIG1-217ENST00000599165 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
LIG1-217ENST00000599165 M0QY20 66 aa8.03□□□□□ -1.12
LIG1-217ENST00000599165 PSCAO43653 123 aa8.03□□□□□ -1.12
LIG1-217ENST00000599165 RPS20P60866 119 aaKnown RBP8.03□□□□□ -1.12
LIG1-217ENST00000599165 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms