RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 OR11H4Q8NGC9 324 aa6.92□□□□□ -1.3
CHMP2A-202ENST00000596708 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
CHMP2A-202ENST00000596708 PHLDA3Q9Y5J5 127 aa6.92□□□□□ -1.3
CHMP2A-202ENST00000596708 A0A087WWL8 130 aa6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 TMEM262E9PQX1 116 aa6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 PEX7O00628 323 aa6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 TPT1P13693 172 aaKnown RBP6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 CIRBP-AS1Q8TBR5 109 aa6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 AQP10Q96PS8 301 aa6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 ALG5Q9Y673 324 aa6.91□□□□□ -1.3
CHMP2A-202ENST00000596708 TMSB15BA0A087X1C1 80 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 KRBOX1C9JBD0 128 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 M0R381 172 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 RPL36AP83881 106 aaKnown RBP6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 Q0VG73 95 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 DNLZQ5SXM8 178 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 Q86TA4 180 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 RPL36ALQ969Q0 106 aaKnown RBP6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 ZC2HC1AQ96GY0 325 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.3
CHMP2A-202ENST00000596708 BORCS7-ASMTA0A0B4J1R7 106 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 SH2D1AO60880 128 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 OXTP01178 125 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 CRIP1P50238 77 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 UBE2G1P62253 170 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 FAM162BQ5T6X4 162 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 HIST1H2BAQ96A08 127 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 NKX6-2Q9C056 277 aaPredicted RBP6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 MED28Q9H204 178 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 ZFP30Q9Y2G7 519 aa6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
CHMP2A-202ENST00000596708 TRBV7-3A0A075B6L6 115 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 TRBV10-1A0A0K0K1A3 114 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 FAM74A7A6NL05 159 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 IGLV2-8P01709 118 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 CRPP02741 224 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 ZNF726P1Q15940 193 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 RPL7L1Q6DKI1 246 aaKnown RBP6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 INO80EQ8NBZ0 244 aaPredicted RBP6.88□□□□□ -1.31
CHMP2A-202ENST00000596708 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 UBE2D3P61077 147 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 UBE2D2P62837 147 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 Q5BKY6 102 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 AKR1C8PQ5T2L2 129 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 C15orf54Q8N8G6 183 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 FMC1Q96HJ9 113 aa6.87□□□□□ -1.31
CHMP2A-202ENST00000596708 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 A6NHS1 94 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 ANGP03950 147 aaKnown RBP6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 ZNF56Q15929 161 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 ZNF674Q2M3X9 581 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 LINC01559Q495D7 138 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 ENHOQ6UWT2 76 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 COX8CQ7Z4L0 72 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 PLA2G2DQ9UNK4 145 aa6.86□□□□□ -1.31
CHMP2A-202ENST00000596708 FXYD6-FXYD2A0A087WZ82 144 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 HLA-DQA1P01909 254 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 AKR1C3P42330 323 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 RAB4BP61018 213 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 MPV17L2Q567V2 206 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 CST9LP1Q5W188 147 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 CHCHD5Q9BSY4 110 aa6.85□□□□□ -1.31
CHMP2A-202ENST00000596708 MAP1LC3B2A6NCE7 125 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 PTTG1O95997 202 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 STOML3Q8TAV4 291 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 MAP1LC3BQ9GZQ8 125 aa6.84□□□□□ -1.31
CHMP2A-202ENST00000596708 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 F5H697 171 aa6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 LTAP01374 205 aa6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 GIPP09681 153 aaPredicted RBP6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 SSTP61278 116 aa6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 PKIAP61925 76 aa6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 RPL19P84098 196 aaKnown RBP6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 MIAQ16674 131 aa6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 ZNF471Q9BX82 626 aaPredicted RBP6.83□□□□□ -1.32
CHMP2A-202ENST00000596708 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 PRSS1P07477 247 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 FHITP49789 147 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 TMEM97Q5BJF2 176 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 SPANXN1Q5VSR9 72 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 DGAT2L7PQ6IED9 249 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 CLPSL2Q6UWE3 100 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 OR10AG1Q8NH19 301 aa6.82□□□□□ -1.32
CHMP2A-202ENST00000596708 PAGE4O60829 102 aa6.81□□□□□ -1.32
CHMP2A-202ENST00000596708 GAGE6Q13070 117 aa6.81□□□□□ -1.32
CHMP2A-202ENST00000596708 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms