RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 ZNF575Q86XF7 245 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 NUP35Q8NFH5 326 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 MRPL16Q9NX20 251 aaKnown RBP13.66□□□□□ -0.22
PNKP-207ENST00000596014 HIGD1CA8MV81 97 aa13.65□□□□□ -0.22
PNKP-207ENST00000596014 ATP5G1P05496 136 aa13.65□□□□□ -0.22
PNKP-207ENST00000596014 GFRA4Q9GZZ7 299 aa13.65□□□□□ -0.22
PNKP-207ENST00000596014 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
PNKP-207ENST00000596014 RASL10AQ92737 203 aa13.64□□□□□ -0.23
PNKP-207ENST00000596014 C9orf85Q96MD7 179 aa13.64□□□□□ -0.23
PNKP-207ENST00000596014 C18orf15Q96N68 181 aa13.64□□□□□ -0.23
PNKP-207ENST00000596014 TRGV2A0A075B6R0 118 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 TMSB15BA0A087X1C1 80 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 IGLL5B9A064 214 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 M0R2P5 195 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 ATP5L2Q7Z4Y8 100 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 GRIFINA4D1Z8 144 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 S100A4P26447 101 aaKnown RBP13.63□□□□□ -0.23
PNKP-207ENST00000596014 ASIPP42127 132 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 RAB4BP61018 213 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 DNLZQ5SXM8 178 aa13.63□□□□□ -0.23
PNKP-207ENST00000596014 A0A1B0GXF2 115 aa13.62□□□□□ -0.23
PNKP-207ENST00000596014 FABP4P15090 132 aa13.62□□□□□ -0.23
PNKP-207ENST00000596014 OR2D3Q8NGH3 330 aa13.62□□□□□ -0.23
PNKP-207ENST00000596014 GTSF1Q8WW33 167 aa13.62□□□□□ -0.23
PNKP-207ENST00000596014 HIST1H2BLQ99880 126 aa13.62□□□□□ -0.23
PNKP-207ENST00000596014 FAM231BA6NCW3 169 aa13.61□□□□□ -0.23
PNKP-207ENST00000596014 F5H768 121 aa13.61□□□□□ -0.23
PNKP-207ENST00000596014 OR10D4PQ8NGN7 298 aa13.61□□□□□ -0.23
PNKP-207ENST00000596014 LYSTQ99698 3801 aa13.61□□□□□ -0.23
PNKP-207ENST00000596014 ZNF876PQ49A33 203 aa13.6□□□□□ -0.23
PNKP-207ENST00000596014 IGHV4-4A0A075B6R2 117 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 H3BVH4 76 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 ARMS2P0C7Q2 107 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 PACRGQ96M98 296 aaPredicted RBP13.59□□□□□ -0.23
PNKP-207ENST00000596014 TCTAP57738 103 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 HBBP68871 147 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 PTH2Q96A98 100 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
PNKP-207ENST00000596014 KMT2CQ8NEZ4 4911 aaKnown RBP13.59□□□□□ -0.23
PNKP-207ENST00000596014 APCSP02743 223 aa13.58□□□□□ -0.24
PNKP-207ENST00000596014 GZMBP10144 247 aa13.58□□□□□ -0.24
PNKP-207ENST00000596014 NACAE9PAV3 2078 aa13.58□□□□□ -0.24
PNKP-207ENST00000596014 IGHV3-53P01767 116 aa13.57□□□□□ -0.24
PNKP-207ENST00000596014 POM121L12Q8N7R1 296 aa13.57□□□□□ -0.24
PNKP-207ENST00000596014 SCRT2Q9NQ03 307 aa13.57□□□□□ -0.24
PNKP-207ENST00000596014 APLNQ9ULZ1 77 aa13.57□□□□□ -0.24
PNKP-207ENST00000596014 SLAQ13239 276 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 NDUFAF3Q9BU61 184 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 CAMPP49913 170 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 Q0VG73 95 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 KIAA1644Q3SXP7 199 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 PYY3Q5JQD4 70 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 TMEM18Q96B42 140 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
PNKP-207ENST00000596014 SRIP30626 198 aa13.55□□□□□ -0.24
PNKP-207ENST00000596014 LINC00310P59036 64 aa13.55□□□□□ -0.24
PNKP-207ENST00000596014 OR4C5Q8NGB2 326 aa13.55□□□□□ -0.24
PNKP-207ENST00000596014 ZNF479Q96JC4 524 aa13.55□□□□□ -0.24
PNKP-207ENST00000596014 TRAV4A0A0B4J268 109 aa13.54□□□□□ -0.24
PNKP-207ENST00000596014 MED14OSP0DP75 135 aa13.54□□□□□ -0.24
PNKP-207ENST00000596014 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
PNKP-207ENST00000596014 RPS20P60866 119 aaKnown RBP13.54□□□□□ -0.24
PNKP-207ENST00000596014 OR10J3Q5JRS4 329 aa13.54□□□□□ -0.24
PNKP-207ENST00000596014 PIK3CD-AS1Q5SR53 167 aa13.54□□□□□ -0.24
PNKP-207ENST00000596014 DMRTA1Q5VZB9 504 aa13.54□□□□□ -0.24
PNKP-207ENST00000596014 SACSQ9NZJ4 4579 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 TRAV26-1A0A087WT03 109 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 F2Z2F3 143 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 ESDP10768 282 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 FHL2Q14192 279 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 SSBP4Q9BWG4 385 aaPredicted RBP13.53□□□□□ -0.24
PNKP-207ENST00000596014 RS1O15537 224 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 SERF1AO75920 110 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 BAGE3Q86Y29 109 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 SYT8Q8NBV8 401 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 NIT2Q9NQR4 276 aa13.53□□□□□ -0.24
PNKP-207ENST00000596014 DNAH1Q9P2D7 4330 aa13.52□□□□□ -0.24
PNKP-207ENST00000596014 ALMS1Q8TCU4 4167 aa13.52□□□□□ -0.25
PNKP-207ENST00000596014 NUPR1O60356 82 aa13.52□□□□□ -0.25
PNKP-207ENST00000596014 OR5AL1P0C617 328 aa13.52□□□□□ -0.25
PNKP-207ENST00000596014 TRGV4A0A0C4DH28 118 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 A0A0J9YY99 117 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 A0A1B0GUT8 65 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 M0R381 172 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 SNAI2O43623 268 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 RIGQ13278 110 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 GATD1Q8NB37 220 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 HHLA3Q9XRX5 114 aa13.51□□□□□ -0.25
PNKP-207ENST00000596014 PCP4L1A6NKN8 68 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 A8MWV9 139 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 OR10AG1Q8NH19 301 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 BORCS7Q96B45 105 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 A0A1B0GW15 77 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 VSIG2Q96IQ7 327 aa13.5□□□□□ -0.25
PNKP-207ENST00000596014 JPT2Q9H910 190 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms