RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
XRCC1-205ENST00000595789 CTXND1A0A1B0GTU2 59 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 FAM74A7A6NL05 159 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 RHODO00212 210 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 UBE2G2P60604 165 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 HIST1H2BAQ96A08 127 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 RMI2Q96E14 147 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 KLK12Q9UKR0 248 aa9.71□□□□□ -0.86
XRCC1-205ENST00000595789 RBFOX3A6NFN3 312 aa9.7□□□□□ -0.86
XRCC1-205ENST00000595789 M0R036 132 aa9.7□□□□□ -0.86
XRCC1-205ENST00000595789 SH2D1AO60880 128 aa9.7□□□□□ -0.86
XRCC1-205ENST00000595789 SYT8Q8NBV8 401 aa9.7□□□□□ -0.86
XRCC1-205ENST00000595789 OR11H4Q8NGC9 324 aa9.7□□□□□ -0.86
XRCC1-205ENST00000595789 ZFP30Q9Y2G7 519 aa9.7□□□□□ -0.86
XRCC1-205ENST00000595789 IGKV2D-24A0A075B6R9 120 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 A0A087WWL8 130 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 ZNF674Q2M3X9 581 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 FAM74A4Q5TZK3 123 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 CIRBP-AS1Q8TBR5 109 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 UBE2WQ96B02 151 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 NKX6-2Q9C056 277 aaPredicted RBP9.69□□□□□ -0.86
XRCC1-205ENST00000595789 MED28Q9H204 178 aa9.69□□□□□ -0.86
XRCC1-205ENST00000595789 SEC11BP0C7V7 166 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 UBE2D3P61077 147 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 UBE2D2P62837 147 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 PHLDA3Q9Y5J5 127 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 URGCP-MRPS24S4R325 110 aa9.68□□□□□ -0.86
XRCC1-205ENST00000595789 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
XRCC1-205ENST00000595789 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
XRCC1-205ENST00000595789 GIPP09681 153 aaPredicted RBP9.67□□□□□ -0.86
XRCC1-205ENST00000595789 INO80EQ8NBZ0 244 aaPredicted RBP9.67□□□□□ -0.86
XRCC1-205ENST00000595789 A0A087WX48 190 aa9.66□□□□□ -0.86
XRCC1-205ENST00000595789 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
XRCC1-205ENST00000595789 BORCS7-ASMTA0A0B4J1R7 106 aa9.66□□□□□ -0.86
XRCC1-205ENST00000595789 M0R381 172 aa9.66□□□□□ -0.86
XRCC1-205ENST00000595789 TPT1P13693 172 aaKnown RBP9.66□□□□□ -0.86
XRCC1-205ENST00000595789 ELOBQ15370 118 aa9.66□□□□□ -0.86
XRCC1-205ENST00000595789 OR10G8Q8NGN5 311 aa9.66□□□□□ -0.86
XRCC1-205ENST00000595789 PKHD1L1Q86WI1 4243 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 PTTG1O95997 202 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 LTAP01374 205 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 RPL36AP83881 106 aaKnown RBP9.65□□□□□ -0.86
XRCC1-205ENST00000595789 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 ZFP82Q8N141 532 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 RPL36ALQ969Q0 106 aaKnown RBP9.65□□□□□ -0.86
XRCC1-205ENST00000595789 FMC1Q96HJ9 113 aa9.65□□□□□ -0.86
XRCC1-205ENST00000595789 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
XRCC1-205ENST00000595789 G3V3Q6 166 aa9.64□□□□□ -0.87
XRCC1-205ENST00000595789 FHITP49789 147 aa9.64□□□□□ -0.87
XRCC1-205ENST00000595789 Q0VG73 95 aa9.64□□□□□ -0.87
XRCC1-205ENST00000595789 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
XRCC1-205ENST00000595789 CYTL1Q9NRR1 136 aa9.64□□□□□ -0.87
XRCC1-205ENST00000595789 FXYD6-FXYD2A0A087WZ82 144 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 MAP1LC3B2A6NCE7 125 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 OXTP01178 125 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 IGLV2-8P01709 118 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 UBE2G1P62253 170 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 AKR1C8PQ5T2L2 129 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 MAP1LC3BQ9GZQ8 125 aa9.63□□□□□ -0.87
XRCC1-205ENST00000595789 UBR4Q5T4S7 5183 aa9.62□□□□□ -0.87
XRCC1-205ENST00000595789 RAB4BP61018 213 aa9.62□□□□□ -0.87
XRCC1-205ENST00000595789 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
XRCC1-205ENST00000595789 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
XRCC1-205ENST00000595789 TCEAL7Q9BRU2 100 aa9.62□□□□□ -0.87
XRCC1-205ENST00000595789 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
XRCC1-205ENST00000595789 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
XRCC1-205ENST00000595789 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
XRCC1-205ENST00000595789 KCNIP4Q6PIL6 250 aa9.61□□□□□ -0.87
XRCC1-205ENST00000595789 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
XRCC1-205ENST00000595789 SSBP4Q9BWG4 385 aaPredicted RBP9.61□□□□□ -0.87
XRCC1-205ENST00000595789 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
XRCC1-205ENST00000595789 RPL19P84098 196 aaKnown RBP9.6□□□□□ -0.87
XRCC1-205ENST00000595789 CST9LP1Q5W188 147 aa9.6□□□□□ -0.87
XRCC1-205ENST00000595789 C15orf54Q8N8G6 183 aa9.6□□□□□ -0.87
XRCC1-205ENST00000595789 MLST8Q9BVC4 326 aa9.6□□□□□ -0.87
XRCC1-205ENST00000595789 SNAI2O43623 268 aa9.59□□□□□ -0.87
XRCC1-205ENST00000595789 PRSS1P07477 247 aa9.59□□□□□ -0.87
XRCC1-205ENST00000595789 CXCL1P09341 107 aa9.59□□□□□ -0.87
XRCC1-205ENST00000595789 AKR1C3P42330 323 aa9.59□□□□□ -0.87
XRCC1-205ENST00000595789 KRTAP26-1Q6PEX3 210 aa9.59□□□□□ -0.87
XRCC1-205ENST00000595789 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
XRCC1-205ENST00000595789 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
XRCC1-205ENST00000595789 PAGE4O60829 102 aa9.58□□□□□ -0.88
XRCC1-205ENST00000595789 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
XRCC1-205ENST00000595789 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
XRCC1-205ENST00000595789 KIF25-AS1Q9Y6Z4 181 aa9.58□□□□□ -0.88
XRCC1-205ENST00000595789 CRPP02741 224 aa9.57□□□□□ -0.88
XRCC1-205ENST00000595789 ANGP03950 147 aaKnown RBP9.57□□□□□ -0.88
XRCC1-205ENST00000595789 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
XRCC1-205ENST00000595789 ZNF56Q15929 161 aa9.57□□□□□ -0.88
XRCC1-205ENST00000595789 MIAQ16674 131 aa9.57□□□□□ -0.88
XRCC1-205ENST00000595789 C9orf163Q8N9P6 203 aa9.57□□□□□ -0.88
XRCC1-205ENST00000595789 STOML3Q8TAV4 291 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms