RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 LINC01620Q4KN68 170 aa14.9□□□□□ -0.02
SSBP4-203ENST00000593641 KCNIP4Q6PIL6 250 aa14.9□□□□□ -0.02
SSBP4-203ENST00000593641 SCXQ7RTU7 201 aa14.9□□□□□ -0.02
SSBP4-203ENST00000593641 KLK12Q9UKR0 248 aa14.9□□□□□ -0.02
SSBP4-203ENST00000593641 PHLDA3Q9Y5J5 127 aa14.9□□□□□ -0.02
SSBP4-203ENST00000593641 A0A087WX48 190 aa14.89□□□□□ -0.03
SSBP4-203ENST00000593641 KRTAP29-1A8MX34 341 aaPredicted RBP14.89□□□□□ -0.03
SSBP4-203ENST00000593641 KRBOX1C9JBD0 128 aa14.89□□□□□ -0.03
SSBP4-203ENST00000593641 DNLZQ5SXM8 178 aa14.89□□□□□ -0.03
SSBP4-203ENST00000593641 RPL7L1Q6DKI1 246 aaKnown RBP14.89□□□□□ -0.03
SSBP4-203ENST00000593641 A0A087WWL8 130 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 ELOBQ15370 118 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 ZNF726P1Q15940 193 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 FAM162BQ5T6X4 162 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 UBE2WQ96B02 151 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 ZC2HC1AQ96GY0 325 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 CHCHD7Q9BUK0 85 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 ZFP30Q9Y2G7 519 aa14.88□□□□□ -0.03
SSBP4-203ENST00000593641 GRIFINA4D1Z8 144 aa14.87□□□□□ -0.03
SSBP4-203ENST00000593641 FAM74A7A6NL05 159 aa14.87□□□□□ -0.03
SSBP4-203ENST00000593641 M0R381 172 aa14.87□□□□□ -0.03
SSBP4-203ENST00000593641 SH2D1AO60880 128 aa14.87□□□□□ -0.03
SSBP4-203ENST00000593641 TPT1P13693 172 aaKnown RBP14.87□□□□□ -0.03
SSBP4-203ENST00000593641 SFRP2Q96HF1 295 aa14.87□□□□□ -0.03
SSBP4-203ENST00000593641 RNF222A6NCQ9 220 aa14.86□□□□□ -0.03
SSBP4-203ENST00000593641 CRIP1P50238 77 aa14.86□□□□□ -0.03
SSBP4-203ENST00000593641 UBE2G1P62253 170 aa14.86□□□□□ -0.03
SSBP4-203ENST00000593641 DNAJC30Q96LL9 226 aa14.86□□□□□ -0.03
SSBP4-203ENST00000593641 TRBV10-1A0A0K0K1A3 114 aa14.85□□□□□ -0.03
SSBP4-203ENST00000593641 GIPP09681 153 aaPredicted RBP14.85□□□□□ -0.03
SSBP4-203ENST00000593641 RPL36AP83881 106 aaKnown RBP14.85□□□□□ -0.03
SSBP4-203ENST00000593641 Q5BKY6 102 aa14.85□□□□□ -0.03
SSBP4-203ENST00000593641 AKR1C8PQ5T2L2 129 aa14.85□□□□□ -0.03
SSBP4-203ENST00000593641 ZFP82Q8N141 532 aa14.85□□□□□ -0.03
SSBP4-203ENST00000593641 RPL36ALQ969Q0 106 aaKnown RBP14.85□□□□□ -0.03
SSBP4-203ENST00000593641 FMC1Q96HJ9 113 aa14.85□□□□□ -0.03
SSBP4-203ENST00000593641 CHAC1Q9BUX1 264 aa14.85□□□□□ -0.03
SSBP4-203ENST00000593641 FXYD6-FXYD2A0A087WZ82 144 aa14.84□□□□□ -0.03
SSBP4-203ENST00000593641 COX8CQ7Z4L0 72 aa14.84□□□□□ -0.03
SSBP4-203ENST00000593641 TMSB15BA0A087X1C1 80 aa14.83□□□□□ -0.04
SSBP4-203ENST00000593641 PTTG1O95997 202 aa14.83□□□□□ -0.04
SSBP4-203ENST00000593641 Q0VG73 95 aa14.83□□□□□ -0.04
SSBP4-203ENST00000593641 LINC01559Q495D7 138 aa14.83□□□□□ -0.04
SSBP4-203ENST00000593641 LRP1Q07954 4544 aaKnown RBP14.82□□□□□ -0.04
SSBP4-203ENST00000593641 TRBV7-3A0A075B6L6 115 aa14.82□□□□□ -0.04
SSBP4-203ENST00000593641 C14orf177Q52M58 125 aa14.82□□□□□ -0.04
SSBP4-203ENST00000593641 ATRAIDQ6UW56 229 aa14.82□□□□□ -0.04
SSBP4-203ENST00000593641 MAP1LC3B2A6NCE7 125 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 TMEM262E9PQX1 116 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 UBE2D3P61077 147 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 UBE2D2P62837 147 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 ZNF674Q2M3X9 581 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 TCEAL7Q9BRU2 100 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 C1orf43Q9BWL3 253 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 MAP1LC3BQ9GZQ8 125 aa14.81□□□□□ -0.04
SSBP4-203ENST00000593641 CRPP02741 224 aa14.8□□□□□ -0.04
SSBP4-203ENST00000593641 CIRBP-AS1Q8TBR5 109 aa14.8□□□□□ -0.04
SSBP4-203ENST00000593641 TRBV6-1A0A0K0K1D8 114 aa14.78□□□□□ -0.04
SSBP4-203ENST00000593641 LTAP01374 205 aa14.78□□□□□ -0.04
SSBP4-203ENST00000593641 CST9LP1Q5W188 147 aa14.78□□□□□ -0.04
SSBP4-203ENST00000593641 STOML3Q8TAV4 291 aa14.78□□□□□ -0.04
SSBP4-203ENST00000593641 FAT3Q8TDW7 4589 aa14.77□□□□□ -0.04
SSBP4-203ENST00000593641 TRBV6-8A0A0A6YYG3 113 aa14.77□□□□□ -0.05
SSBP4-203ENST00000593641 AKR1C3P42330 323 aa14.77□□□□□ -0.05
SSBP4-203ENST00000593641 ZNF56Q15929 161 aa14.77□□□□□ -0.05
SSBP4-203ENST00000593641 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.77□□□□□ -0.05
SSBP4-203ENST00000593641 OR10G8Q8NGN5 311 aa14.77□□□□□ -0.05
SSBP4-203ENST00000593641 FHITP49789 147 aa14.76□□□□□ -0.05
SSBP4-203ENST00000593641 RAB4BP61018 213 aa14.76□□□□□ -0.05
SSBP4-203ENST00000593641 C15orf54Q8N8G6 183 aa14.76□□□□□ -0.05
SSBP4-203ENST00000593641 IGLV2-8P01709 118 aa14.75□□□□□ -0.05
SSBP4-203ENST00000593641 SERTAD4-AS1Q5TG53 156 aa14.75□□□□□ -0.05
SSBP4-203ENST00000593641 ANGP03950 147 aaKnown RBP14.74□□□□□ -0.05
SSBP4-203ENST00000593641 KRTAP10-4P60372 401 aaPredicted RBP14.74□□□□□ -0.05
SSBP4-203ENST00000593641 PKIAP61925 76 aa14.74□□□□□ -0.05
SSBP4-203ENST00000593641 MPV17L2Q567V2 206 aa14.74□□□□□ -0.05
SSBP4-203ENST00000593641 HMCN2Q8NDA2 5059 aa14.74□□□□□ -0.05
SSBP4-203ENST00000593641 OXTP01178 125 aa14.73□□□□□ -0.05
SSBP4-203ENST00000593641 ENHOQ6UWT2 76 aa14.73□□□□□ -0.05
SSBP4-203ENST00000593641 NEXN-AS1Q8NBZ9 246 aa14.73□□□□□ -0.05
SSBP4-203ENST00000593641 HLA-DQA1P01909 254 aa14.72□□□□□ -0.05
SSBP4-203ENST00000593641 OR10AG1Q8NH19 301 aa14.72□□□□□ -0.05
SSBP4-203ENST00000593641 CHCHD5Q9BSY4 110 aa14.72□□□□□ -0.05
SSBP4-203ENST00000593641 ZNF471Q9BX82 626 aaPredicted RBP14.72□□□□□ -0.05
SSBP4-203ENST00000593641 USP17L23D6RBM5 183 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 ARPC5O15511 151 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 PAGE4O60829 102 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 S100A9P06702 114 aaKnown RBP14.7□□□□□ -0.06
SSBP4-203ENST00000593641 CXCL1P09341 107 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 RPL19P84098 196 aaKnown RBP14.7□□□□□ -0.06
SSBP4-203ENST00000593641 MIAQ16674 131 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 SPANXN1Q5VSR9 72 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 PRR27Q6MZM9 219 aa14.7□□□□□ -0.06
SSBP4-203ENST00000593641 TMEM97Q5BJF2 176 aa14.69□□□□□ -0.06
SSBP4-203ENST00000593641 CYTL1Q9NRR1 136 aa14.69□□□□□ -0.06
SSBP4-203ENST00000593641 PKHD1L1Q86WI1 4243 aa14.68□□□□□ -0.06
SSBP4-203ENST00000593641 F5H697 171 aa14.68□□□□□ -0.06
SSBP4-203ENST00000593641 RPL37AP61513 92 aaKnown RBP14.68□□□□□ -0.06
SSBP4-203ENST00000593641 PFDN1O60925 122 aa14.67□□□□□ -0.06
SSBP4-203ENST00000593641 BATF3Q9NR55 127 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms