RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	ZFP82	Q8N141	532 aa		6.29	□□□□□ -1.4
DNMT1-223	ENST00000591239	LYPD6B	Q8NI32	183 aa		6.29	□□□□□ -1.4
DNMT1-223	ENST00000591239	SMIM12	Q96EX1	92 aa		6.29	□□□□□ -1.4
DNMT1-223	ENST00000591239	SAMD10	Q9BYL1	202 aa		6.29	□□□□□ -1.4
DNMT1-223	ENST00000591239	TRBV20OR9-2	A0A075B6H5	130 aa		6.28	□□□□□ -1.4
DNMT1-223	ENST00000591239	RHOD	O00212	210 aa		6.28	□□□□□ -1.4
DNMT1-223	ENST00000591239	MED14OS	P0DP75	135 aa		6.28	□□□□□ -1.4
DNMT1-223	ENST00000591239	DAZAP1	Q96EP5	407 aa	Known RBP	6.28	□□□□□ -1.4
DNMT1-223	ENST00000591239	SFRP2	Q96HF1	295 aa		6.28	□□□□□ -1.4
DNMT1-223	ENST00000591239		A0A087WWL8	130 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	C19orf71	A6NCJ1	209 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	RBFOX3	A6NFN3	312 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	SNAI2	O43623	268 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	CRYGD	P07320	174 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	OR5AL1	P0C617	328 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	TIRAP	P58753	221 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	FAM74A4	Q5TZK3	123 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	WFDC10B	Q8IUB3	73 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	C14orf178	Q8N769	122 aa	Predicted RBP	6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	OR10AG1	Q8NH19	301 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239		Q9UF83	564 aa		6.27	□□□□□ -1.41
DNMT1-223	ENST00000591239	TRAV9-2	A0A087WT02	112 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	MUC21	A0A0G2JKD1	596 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	MUC21	A0A140T8X8	626 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	BTF3	P20290	206 aa	Known RBP	6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	SPANXN1	Q5VSR9	72 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	OR2D3	Q8NGH3	330 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	ATP6V0E2	Q8NHE4	81 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	GTSF1L	Q9H1H1	148 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	BIN3	Q9NQY0	253 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	LY96	Q9Y6Y9	160 aa		6.26	□□□□□ -1.41
DNMT1-223	ENST00000591239	GAGE12J	A6NER3	117 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	TMEM250	H0YL14	139 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239		K7EP13	123 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239		P01737	135 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	DNAH10OS	P0CZ25	163 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	LINC00694	P0DN24	101 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	GZMB	P10144	247 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	EVI2A	P22794	236 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	LINC00315	P59091	139 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	RPS20	P60866	119 aa	Known RBP	6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	SST	P61278	116 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	GAGE1	Q13065	139 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	GAGE4	Q13068	117 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	GAGE5	Q13069	117 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	GAGE13	Q4V321	117 aa		6.25	□□□□□ -1.41
DNMT1-223	ENST00000591239	TRAV8-6	A0A0B4J262	113 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	IGHV3-38	A0A0C4DH36	116 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	XKRY2	A2RUG3	117 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239		K7EN84	100 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	IGLC6	P0CF74	106 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	OR10J3	Q5JRS4	329 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	TOR2A	Q5JU69	321 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	LELP1	Q5T871	98 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	LCE2C	Q5TA81	110 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	FER1L6-AS1	Q8NA97	138 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	NUDT10	Q8NFP7	164 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	OCC1	Q8TAD7	63 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	NUDT11	Q96G61	164 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	TPPP3	Q9BW30	176 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	EIF5A2	Q9GZV4	153 aa	Known RBP	6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	TNFRSF18	Q9Y5U5	241 aa		6.24	□□□□□ -1.41
DNMT1-223	ENST00000591239	TRBV10-1	A0A0K0K1A3	114 aa		6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	CEBPG	P53567	150 aa		6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	RAB4B	P61018	213 aa		6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	ZNF56	Q15929	161 aa		6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	LINC01556	Q5JQF7	62 aa		6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239		Q6ZRN7	208 aa	Predicted RBP	6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	FAM210A	Q96ND0	272 aa		6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	RNASE7	Q9H1E1	156 aa	Known RBP	6.23	□□□□□ -1.41
DNMT1-223	ENST00000591239	TRBV7-3	A0A075B6L6	115 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239		A0A087WWC5	75 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239		F2Z2F3	143 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	FAM229A	H3BQW9	127 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	NDUFS6	O75380	124 aa	Known RBP	6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	SMIM17	P0DL12	118 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	RPL36A	P83881	106 aa	Known RBP	6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	TEX261	Q6UWH6	196 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	LYZL1	Q6UWQ5	148 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	NFE4	Q86UQ8	179 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	C10orf126	Q8N4M7	172 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	RPL36AL	Q969Q0	106 aa	Known RBP	6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	AP1S3	Q96PC3	154 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	MSRB1	Q9NZV6	116 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239	KIF25-AS1	Q9Y6Z4	181 aa		6.22	□□□□□ -1.41
DNMT1-223	ENST00000591239		F5H697	171 aa		6.21	□□□□□ -1.42
DNMT1-223	ENST00000591239	CACNG7	P62955	275 aa		6.21	□□□□□ -1.42
DNMT1-223	ENST00000591239	SMIM7	Q9BQ49	75 aa		6.21	□□□□□ -1.42
DNMT1-223	ENST00000591239	RPP21	Q9H633	154 aa	Known RBP	6.21	□□□□□ -1.42
DNMT1-223	ENST00000591239	DNAH11	Q96DT5	4516 aa		6.21	□□□□□ -1.42
DNMT1-223	ENST00000591239	IGHV3-30	P01768	117 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	IGHV3-33	P01772	117 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	SRP19	P09132	144 aa	Known RBP	6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	IGHV3-30-3	P0DP02	117 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	IGHV3-30-5	P0DP03	117 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	NTF3	P20783	257 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	CTRL	P40313	264 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	UBE2D3	P61077	147 aa		6.2	□□□□□ -1.42
DNMT1-223	ENST00000591239	UBE2D2	P62837	147 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms