RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 TRPT1Q86TN4 253 aaKnown RBP6.88□□□□□ -1.31
VPS25-205ENST00000590339 AP5S1Q9NUS5 200 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 ZMAT5Q9UDW3 170 aaKnown RBP6.88□□□□□ -1.31
VPS25-205ENST00000590339 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 TGP01266 2768 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 IGLV2-18A0A075B6J9 118 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 OR11H12B2RN74 326 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 SPRY2O43597 315 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 TNFRSF6BO95407 300 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
VPS25-205ENST00000590339 CMC4P56277 68 aaPredicted RBP6.87□□□□□ -1.31
VPS25-205ENST00000590339 LINC00315P59091 139 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 Q8N1Y9 231 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 C19orf73Q9NVV2 129 aa6.87□□□□□ -1.31
VPS25-205ENST00000590339 TIMM8BQ9Y5J9 83 aaPredicted RBP6.87□□□□□ -1.31
VPS25-205ENST00000590339 KIR2DL5BA0A0G2JN68 375 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 KIR2DL5BA0A0G2JPC4 375 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 SCGB1D1O95968 90 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 INSP01308 110 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 GATA1P15976 413 aaPredicted RBP6.86□□□□□ -1.31
VPS25-205ENST00000590339 FXYD7P58549 80 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 KRTDAPP60985 99 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 KIR2DL5AQ8N109 375 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 PRSS3P2Q8NHM4 247 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
VPS25-205ENST00000590339 MDFICQ9P1T7 246 aa6.86□□□□□ -1.31
VPS25-205ENST00000590339 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
VPS25-205ENST00000590339 C14orf178Q8N769 122 aaPredicted RBP6.85□□□□□ -1.31
VPS25-205ENST00000590339 Q8N8P6 123 aa6.85□□□□□ -1.31
VPS25-205ENST00000590339 RASL10AQ92737 203 aa6.85□□□□□ -1.31
VPS25-205ENST00000590339 PTH2Q96A98 100 aa6.85□□□□□ -1.31
VPS25-205ENST00000590339 SORL1Q92673 2214 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 TRAV26-2A0A0B4J265 109 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 LOC389332A0A1B0GUA5 103 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 PCP4L1A6NKN8 68 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 LEPROTL1O95214 131 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 HBDP02042 147 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
VPS25-205ENST00000590339 INSL3P51460 131 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 PKIAP61925 76 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
VPS25-205ENST00000590339 PIK3CD-AS1Q5SR53 167 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 SPATA12Q7Z6I5 190 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 STHQ8IWL8 128 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 SYT8Q8NBV8 401 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 B9D2Q9BPU9 175 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 HSPB8Q9UJY1 196 aa6.84□□□□□ -1.31
VPS25-205ENST00000590339 CBY3A6NI87 242 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 MGPP08493 103 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 ZNF664Q8N3J9 261 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 C11orf72Q8NBR9 251 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 C20orf78Q9BR46 151 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 TMEM70Q9BUB7 260 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 JPT2Q9H910 190 aa6.83□□□□□ -1.32
VPS25-205ENST00000590339 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 PPP1R17O96001 155 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 CRYGDP07320 174 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 GIG44P09565 113 aaPredicted RBP6.82□□□□□ -1.32
VPS25-205ENST00000590339 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 PET117Q6UWS5 81 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
VPS25-205ENST00000590339 WFDC10AQ9H1F0 79 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
VPS25-205ENST00000590339 TRBV6-5A0A0K0K1A5 114 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 LINC00587B1AMM8 73 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 TSTD3H0UI37 97 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 SMIM17P0DL12 118 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 FCER1GP30273 86 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
VPS25-205ENST00000590339 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 UFSP1Q6NVU6 142 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 SPXQ9BT56 116 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 NDUFAF3Q9BU61 184 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 VAMP8Q9BV40 100 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 NACAE9PAV3 2078 aa6.81□□□□□ -1.32
VPS25-205ENST00000590339 A0A087WWL8 130 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 K7EMI3 77 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 M0R2P5 195 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 NHLRC4P0CG21 123 aaPredicted RBP6.8□□□□□ -1.32
VPS25-205ENST00000590339 NUTF2P61970 127 aaKnown RBP6.8□□□□□ -1.32
VPS25-205ENST00000590339 MORN3Q6PF18 240 aaPredicted RBP6.8□□□□□ -1.32
VPS25-205ENST00000590339 LINC01587Q99440 93 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 MAP1LC3CQ9BXW4 147 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 PRO1933Q9H354 126 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 XCL2Q9UBD3 114 aa6.8□□□□□ -1.32
VPS25-205ENST00000590339 DNAH3Q8TD57 4116 aa6.79□□□□□ -1.32
VPS25-205ENST00000590339 C20orf202A1L168 122 aa6.79□□□□□ -1.32
VPS25-205ENST00000590339 M0QY20 66 aa6.79□□□□□ -1.32
VPS25-205ENST00000590339 POLR2KP53803 58 aaKnown RBP6.79□□□□□ -1.32
VPS25-205ENST00000590339 LAGE3Q14657 143 aa6.79□□□□□ -1.32
VPS25-205ENST00000590339 ZNF876PQ49A33 203 aa6.79□□□□□ -1.32
VPS25-205ENST00000590339 SBSPONQ8IVN8 264 aa6.79□□□□□ -1.32
VPS25-205ENST00000590339 RNASE8Q8TDE3 154 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms