RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 INO80EQ8NBZ0 244 aaPredicted RBP9.04□□□□□ -0.96
HDAC5-208ENST00000588419 UBE2WQ96B02 151 aa9.04□□□□□ -0.96
HDAC5-208ENST00000588419 ZC2HC1AQ96GY0 325 aa9.04□□□□□ -0.96
HDAC5-208ENST00000588419 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
HDAC5-208ENST00000588419 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
HDAC5-208ENST00000588419 TPT1P13693 172 aaKnown RBP9.03□□□□□ -0.96
HDAC5-208ENST00000588419 UBE2G1P62253 170 aa9.03□□□□□ -0.96
HDAC5-208ENST00000588419 Q5BKY6 102 aa9.03□□□□□ -0.96
HDAC5-208ENST00000588419 AKR1C8PQ5T2L2 129 aa9.03□□□□□ -0.96
HDAC5-208ENST00000588419 UFSP1Q6NVU6 142 aa9.03□□□□□ -0.96
HDAC5-208ENST00000588419 Q6ZSA8 131 aa9.03□□□□□ -0.96
HDAC5-208ENST00000588419 SCXQ7RTU7 201 aa9.03□□□□□ -0.96
HDAC5-208ENST00000588419 A0A087WX48 190 aa9.02□□□□□ -0.97
HDAC5-208ENST00000588419 KRBOX1C9JBD0 128 aa9.02□□□□□ -0.97
HDAC5-208ENST00000588419 NIT1Q86X76 327 aa9.02□□□□□ -0.97
HDAC5-208ENST00000588419 COX11Q9Y6N1 276 aa9.02□□□□□ -0.97
HDAC5-208ENST00000588419 FAM74A7A6NL05 159 aa9.01□□□□□ -0.97
HDAC5-208ENST00000588419 SEC11BP0C7V7 166 aa9.01□□□□□ -0.97
HDAC5-208ENST00000588419 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
HDAC5-208ENST00000588419 FAM162BQ5T6X4 162 aa9.01□□□□□ -0.97
HDAC5-208ENST00000588419 MAP1LC3B2A6NCE7 125 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 RNF222A6NCQ9 220 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 TMEM262E9PQX1 116 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 CRIP1P50238 77 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
HDAC5-208ENST00000588419 ZNF56Q15929 161 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 ZFP82Q8N141 532 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 Q8N976 141 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 DEFB104AQ8WTQ1 72 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
HDAC5-208ENST00000588419 HIST1H2BAQ96A08 127 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 SFRP2Q96HF1 295 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 MAP1LC3BQ9GZQ8 125 aa9□□□□□ -0.97
HDAC5-208ENST00000588419 CRPP02741 224 aa8.99□□□□□ -0.97
HDAC5-208ENST00000588419 GIPP09681 153 aaPredicted RBP8.99□□□□□ -0.97
HDAC5-208ENST00000588419 AKR1C3P42330 323 aa8.99□□□□□ -0.97
HDAC5-208ENST00000588419 CST9LP1Q5W188 147 aa8.99□□□□□ -0.97
HDAC5-208ENST00000588419 FMC1Q96HJ9 113 aa8.99□□□□□ -0.97
HDAC5-208ENST00000588419 PTTG1O95997 202 aa8.98□□□□□ -0.97
HDAC5-208ENST00000588419 ELOBQ15370 118 aa8.98□□□□□ -0.97
HDAC5-208ENST00000588419 STOML3Q8TAV4 291 aa8.98□□□□□ -0.97
HDAC5-208ENST00000588419 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
HDAC5-208ENST00000588419 NKX6-2Q9C056 277 aaPredicted RBP8.98□□□□□ -0.97
HDAC5-208ENST00000588419 ZFP30Q9Y2G7 519 aa8.98□□□□□ -0.97
HDAC5-208ENST00000588419 A0A1B0GV50 99 aa8.97□□□□□ -0.97
HDAC5-208ENST00000588419 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
HDAC5-208ENST00000588419 IGLV2-8P01709 118 aa8.97□□□□□ -0.97
HDAC5-208ENST00000588419 HLA-DQA1P01909 254 aa8.97□□□□□ -0.97
HDAC5-208ENST00000588419 LINC01559Q495D7 138 aa8.97□□□□□ -0.97
HDAC5-208ENST00000588419 DNLZQ5SXM8 178 aa8.97□□□□□ -0.97
HDAC5-208ENST00000588419 C15orf54Q8N8G6 183 aa8.97□□□□□ -0.97
HDAC5-208ENST00000588419 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 ANGP03950 147 aaKnown RBP8.96□□□□□ -0.98
HDAC5-208ENST00000588419 UBE2D3P61077 147 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 SSTP61278 116 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 UBE2D2P62837 147 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 RPL19P84098 196 aaKnown RBP8.96□□□□□ -0.98
HDAC5-208ENST00000588419 ZNF674Q2M3X9 581 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 CHAC1Q9BUX1 264 aa8.96□□□□□ -0.98
HDAC5-208ENST00000588419 MUC21A0A0G2JKD1 596 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 MUC21A0A140T8X8 626 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 ARPC5O15511 151 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 Q0VG73 95 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 MPV17L2Q567V2 206 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 CLPSL2Q6UWE3 100 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 CHCHD5Q9BSY4 110 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 CHCHD7Q9BUK0 85 aa8.95□□□□□ -0.98
HDAC5-208ENST00000588419 F5H697 171 aa8.94□□□□□ -0.98
HDAC5-208ENST00000588419 LTAP01374 205 aa8.94□□□□□ -0.98
HDAC5-208ENST00000588419 C14orf177Q52M58 125 aa8.94□□□□□ -0.98
HDAC5-208ENST00000588419 NEXN-AS1Q8NBZ9 246 aa8.94□□□□□ -0.98
HDAC5-208ENST00000588419 OR10AG1Q8NH19 301 aa8.94□□□□□ -0.98
HDAC5-208ENST00000588419 TRBV6-8A0A0A6YYG3 113 aa8.93□□□□□ -0.98
HDAC5-208ENST00000588419 PAGE4O60829 102 aa8.93□□□□□ -0.98
HDAC5-208ENST00000588419 FHITP49789 147 aa8.93□□□□□ -0.98
HDAC5-208ENST00000588419 PRR27Q6MZM9 219 aa8.93□□□□□ -0.98
HDAC5-208ENST00000588419 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.93□□□□□ -0.98
HDAC5-208ENST00000588419 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 USP17L23D6RBM5 183 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 RAB4BP61018 213 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 SPANXN1Q5VSR9 72 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 ATRAIDQ6UW56 229 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 ENHOQ6UWT2 76 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 COX8CQ7Z4L0 72 aa8.92□□□□□ -0.98
HDAC5-208ENST00000588419 ZNF471Q9BX82 626 aaPredicted RBP8.92□□□□□ -0.98
HDAC5-208ENST00000588419 TRBV6-1A0A0K0K1D8 114 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 SMLR1H3BR10 107 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 PFDN1O60925 122 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
HDAC5-208ENST00000588419 OR10G8Q8NGN5 311 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 FAM213BQ8TBF2 198 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 TCEAL7Q9BRU2 100 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
HDAC5-208ENST00000588419 GAGE6Q13070 117 aa8.9□□□□□ -0.98
HDAC5-208ENST00000588419 CYTL1Q9NRR1 136 aa8.9□□□□□ -0.98
HDAC5-208ENST00000588419 G3V3Q6 166 aa8.89□□□□□ -0.99
HDAC5-208ENST00000588419 MGPP08493 103 aa8.89□□□□□ -0.99
HDAC5-208ENST00000588419 SMIM17P0DL12 118 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms