RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-215	ENST00000588030	PKD1	P98161	4303 aa		13.59	□□□□□ -0.23
CIRBP-215	ENST00000588030	DYNC1H1	Q14204	4646 aa	Known RBP	13.58	□□□□□ -0.24
CIRBP-215	ENST00000588030	TMEM250	H0YL14	139 aa		13.58	□□□□□ -0.24
CIRBP-215	ENST00000588030	UFSP1	Q6NVU6	142 aa		13.58	□□□□□ -0.24
CIRBP-215	ENST00000588030	RHOD	O00212	210 aa		13.57	□□□□□ -0.24
CIRBP-215	ENST00000588030	C14orf178	Q8N769	122 aa	Predicted RBP	13.57	□□□□□ -0.24
CIRBP-215	ENST00000588030	OCC1	Q8TAD7	63 aa		13.57	□□□□□ -0.24
CIRBP-215	ENST00000588030	HERC2	O95714	4834 aa		13.57	□□□□□ -0.24
CIRBP-215	ENST00000588030	DNAH11	Q96DT5	4516 aa		13.56	□□□□□ -0.24
CIRBP-215	ENST00000588030		K7EN84	100 aa		13.56	□□□□□ -0.24
CIRBP-215	ENST00000588030	SIVA1	O15304	175 aa		13.56	□□□□□ -0.24
CIRBP-215	ENST00000588030	SNAI2	O43623	268 aa		13.56	□□□□□ -0.24
CIRBP-215	ENST00000588030	SOHLH1	Q5JUK2	328 aa		13.56	□□□□□ -0.24
CIRBP-215	ENST00000588030	PKHD1	P08F94	4074 aa		13.56	□□□□□ -0.24
CIRBP-215	ENST00000588030	GAGE12J	A6NER3	117 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	CRYGD	P07320	174 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	OR5AL1	P0C617	328 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	RPS20	P60866	119 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	GAGE1	Q13065	139 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	GAGE4	Q13068	117 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	GAGE5	Q13069	117 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	GAGE13	Q4V321	117 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	SH2D6	Q7Z4S9	175 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	NUDT10	Q8NFP7	164 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	NUDT11	Q96G61	164 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	KRTAP1-5	Q9BYS1	174 aa		13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	RNASE7	Q9H1E1	156 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-215	ENST00000588030	TTC32	Q5I0X7	151 aa		13.54	□□□□□ -0.24
CIRBP-215	ENST00000588030	FER1L6-AS1	Q8NA97	138 aa		13.54	□□□□□ -0.24
CIRBP-215	ENST00000588030		Q9UF83	564 aa		13.54	□□□□□ -0.24
CIRBP-215	ENST00000588030	XKRY2	A2RUG3	117 aa		13.54	□□□□□ -0.24
CIRBP-215	ENST00000588030	WFDC10B	Q8IUB3	73 aa		13.54	□□□□□ -0.24
CIRBP-215	ENST00000588030	C6orf223	Q8N319	242 aa		13.53	□□□□□ -0.24
CIRBP-215	ENST00000588030	ATP6V0E2	Q8NHE4	81 aa		13.53	□□□□□ -0.24
CIRBP-215	ENST00000588030	SMIM7	Q9BQ49	75 aa		13.53	□□□□□ -0.24
CIRBP-215	ENST00000588030	KIAA1109	Q2LD37	5005 aa		13.53	□□□□□ -0.24
CIRBP-215	ENST00000588030	SRP19	P09132	144 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-215	ENST00000588030	S100A1	P23297	94 aa		13.52	□□□□□ -0.25
CIRBP-215	ENST00000588030	ZNF56	Q15929	161 aa		13.52	□□□□□ -0.25
CIRBP-215	ENST00000588030	IGLC6	P0CF74	106 aa		13.51	□□□□□ -0.25
CIRBP-215	ENST00000588030	RPP21	Q9H633	154 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-215	ENST00000588030	ZNF727	A8MUV8	499 aa		13.5	□□□□□ -0.25
CIRBP-215	ENST00000588030		F5H697	171 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	SMIM17	P0DL12	118 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	TNP2	Q05952	138 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	OR10J3	Q5JRS4	329 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	LYZL1	Q6UWQ5	148 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	MSRB1	Q9NZV6	116 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	LY96	Q9Y6Y9	160 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030		A0A1W2PPQ1	181 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	AP1S3	Q96PC3	154 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	GTSF1L	Q9H1H1	148 aa		13.49	□□□□□ -0.25
CIRBP-215	ENST00000588030	ERVFC1-1	P60608	527 aa		13.48	□□□□□ -0.25
CIRBP-215	ENST00000588030	SRSF3	P84103	164 aa	Known RBP	13.48	□□□□□ -0.25
CIRBP-215	ENST00000588030	TRAV8-6	A0A0B4J262	113 aa		13.47	□□□□□ -0.25
CIRBP-215	ENST00000588030		F2Z2F3	143 aa		13.47	□□□□□ -0.25
CIRBP-215	ENST00000588030	GATC	O43716	136 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-215	ENST00000588030	TIRAP	P58753	221 aa		13.47	□□□□□ -0.25
CIRBP-215	ENST00000588030	RAB4B	P61018	213 aa		13.47	□□□□□ -0.25
CIRBP-215	ENST00000588030	CACNG7	P62955	275 aa		13.47	□□□□□ -0.25
CIRBP-215	ENST00000588030		C9JQL5	133 aa		13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	NDUFS6	O75380	124 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	MGP	P08493	103 aa		13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	LINC00694	P0DN24	101 aa		13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	EVI2A	P22794	236 aa		13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	PEA15	Q15121	130 aa		13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	LINC01551	Q86U37	167 aa		13.46	□□□□□ -0.25
CIRBP-215	ENST00000588030	IGHV3-38	A0A0C4DH36	116 aa		13.45	□□□□□ -0.26
CIRBP-215	ENST00000588030	LINC00315	P59091	139 aa		13.45	□□□□□ -0.26
CIRBP-215	ENST00000588030	LELP1	Q5T871	98 aa		13.45	□□□□□ -0.26
CIRBP-215	ENST00000588030	TRAV9-2	A0A087WT02	112 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	NTF3	P20783	257 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	RPL36A	P83881	106 aa	Known RBP	13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	RPL36AL	Q969Q0	106 aa	Known RBP	13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	TNFRSF18	Q9Y5U5	241 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	TRBV10-1	A0A0K0K1A3	114 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	DNAH10OS	P0CZ25	163 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	TWIST1	Q15672	202 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	FAM231D	Q6ZW35	169 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	KIF25-AS1	Q9Y6Z4	181 aa		13.44	□□□□□ -0.26
CIRBP-215	ENST00000588030	IGHV3-30	P01768	117 aa		13.43	□□□□□ -0.26
CIRBP-215	ENST00000588030	IGHV3-33	P01772	117 aa		13.43	□□□□□ -0.26
CIRBP-215	ENST00000588030	IGHV3-30-3	P0DP02	117 aa		13.43	□□□□□ -0.26
CIRBP-215	ENST00000588030	IGHV3-30-5	P0DP03	117 aa		13.43	□□□□□ -0.26
CIRBP-215	ENST00000588030	CTRL	P40313	264 aa		13.43	□□□□□ -0.26
CIRBP-215	ENST00000588030	GTSF1	Q8WW33	167 aa		13.43	□□□□□ -0.26
CIRBP-215	ENST00000588030	TRBV7-3	A0A075B6L6	115 aa		13.42	□□□□□ -0.26
CIRBP-215	ENST00000588030	RAB14	P61106	215 aa		13.42	□□□□□ -0.26
CIRBP-215	ENST00000588030	IFITM2	Q01629	132 aa		13.42	□□□□□ -0.26
CIRBP-215	ENST00000588030	TMEM241	Q24JQ0	296 aa		13.42	□□□□□ -0.26
CIRBP-215	ENST00000588030	NEXN-AS1	Q8NBZ9	246 aa		13.42	□□□□□ -0.26
CIRBP-215	ENST00000588030		A8MWL6	223 aa		13.41	□□□□□ -0.26
CIRBP-215	ENST00000588030	TRGC1	P0CF51	173 aa		13.41	□□□□□ -0.26
CIRBP-215	ENST00000588030	PGLYRP4	Q96LB8	373 aa		13.41	□□□□□ -0.26
CIRBP-215	ENST00000588030	UBE2D3	P61077	147 aa		13.4	□□□□□ -0.26
CIRBP-215	ENST00000588030	UBE2D2	P62837	147 aa		13.4	□□□□□ -0.26
CIRBP-215	ENST00000588030	ADIRF	Q15847	76 aa		13.4	□□□□□ -0.26
CIRBP-215	ENST00000588030	FAM74A3	Q4VXF1	159 aa		13.4	□□□□□ -0.26
CIRBP-215	ENST00000588030	BTF3	P20290	206 aa	Known RBP	13.39	□□□□□ -0.27

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