RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TNFAIP8L3Q5GJ75 292 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 IBA57Q5T440 356 aaKnown RBP1.4□□□□□ -2.19
VAPA-208ENST00000584796 GLT8D1Q68CQ7 371 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 ZNF833PQ6ZTB9 187 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 SCXQ7RTU7 201 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 UBE2DNLQ8IWF7 75 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 C12orf45Q8N5I9 185 aaPredicted RBP1.4□□□□□ -2.19
VAPA-208ENST00000584796 OR13C8Q8NGS7 320 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 OR4K15Q8NH41 348 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 RAB2BQ8WUD1 216 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 LZICQ8WZA0 190 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 ARL11Q969Q4 196 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 DNAJC30Q96LL9 226 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 GPER1Q99527 375 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 TMEM70Q9BUB7 260 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 TSSK6Q9BXA6 273 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 CCDC90BQ9GZT6 254 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 OR2D2Q9H210 308 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 SH3BGRL3Q9H299 93 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 SPANXA1Q9NS26 97 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 METTL1Q9UBP6 276 aaKnown RBP1.4□□□□□ -2.19
VAPA-208ENST00000584796 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 SS18L2Q9UHA2 77 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 JPT1Q9UK76 154 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 PRNDQ9UKY0 176 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 LINC00588Q9Y4M8 146 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 HSPB11Q9Y547 144 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 TRAPPC1Q9Y5R8 145 aa1.4□□□□□ -2.19
VAPA-208ENST00000584796 A0A087WX48 190 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 TMEM269A0A1B0GVZ9 245 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 LOC107986453A0A1B0GWG9 222 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 ZNF98A6NK75 572 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 A8MWP6 167 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 LINC00587B1AMM8 73 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 C9JCJ5 164 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 K7EP13 123 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 AIPO00170 330 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 LST1O00453 97 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 COX7A2LO14548 114 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 DEGS1O15121 323 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 HMGB3O15347 200 aaKnown RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 PFDN1O60925 122 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 NDUFC2O95298 119 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 IGKV1-17P01599 117 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 IL4P05112 153 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 CTSDP07339 412 aaPredicted RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 HTN3P15516 51 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 S100GP29377 79 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 GNG5P63218 68 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 FXYD3Q14802 87 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 MRPL51Q4U2R6 128 aaKnown RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 MORN2Q502X0 79 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 TMEM128Q5BJH2 165 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 ZNF322Q6U7Q0 402 aaPredicted RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 IGFL1Q6UW32 110 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 IDO2Q6ZQW0 420 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 Q6ZS49 121 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 TCF24Q7RTU0 167 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 GPHB5Q86YW7 130 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 EIF4E3Q8N5X7 224 aaKnown RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 ZFAND2AQ8N6M9 145 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 OR8J3Q8NGG0 315 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 DEDD2Q8WXF8 326 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 ACOT12Q8WYK0 555 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 RBPMSQ93062 196 aaKnown RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 GPR146Q96CH1 333 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 SEC22CQ9BRL7 303 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 PBDC1Q9BVG4 233 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 CST11Q9H112 138 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 ZNF586Q9NXT0 402 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 COA4Q9NYJ1 87 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 GSKIPQ9P0R6 139 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 PAIP2BQ9ULR5 123 aaKnown RBP1.39□□□□□ -2.19
VAPA-208ENST00000584796 SSR3Q9UNL2 185 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 MUC17Q685J3 4493 aa1.39□□□□□ -2.19
VAPA-208ENST00000584796 TRBV20OR9-2A0A075B6H5 130 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 MAP1LC3B2A6NCE7 125 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 A6NED7 52 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 A8MUN3 132 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 A8MWP4 228 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 H3BMM0 161 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 GEMIN2O14893 280 aaKnown RBP1.38□□□□□ -2.19
VAPA-208ENST00000584796 BET1O15155 118 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 PLA2G10O15496 165 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 SLC25A20O43772 301 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 GADD45GO95257 159 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 CYB5AP00167 134 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 HTR1AP08908 422 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 OR10J4P0C629 311 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
VAPA-208ENST00000584796 IGHV3-30-3P0DP02 117 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 NPPCP23582 126 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 EMP1P54849 157 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 FXYD7P58549 80 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 DEFA1P59665 94 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 MOBPQ13875 183 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 WFDC2Q14508 124 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 PLGLAQ15195 96 aa1.38□□□□□ -2.19
VAPA-208ENST00000584796 WHAMMP3Q1A5X7 153 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms