RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
RNF43-208ENST00000584437 Q6ZQT7 251 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 CLEC2BQ92478 149 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 IGKV2D-24A0A075B6R9 120 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 UBE2BP63146 152 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 Q8N1Y9 231 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 K7EMT4 169 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 RITA1Q96K30 269 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 Q96MF0 132 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 CAMK2N2Q96S95 79 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 MAPK1IP1LQ8NDC0 245 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 ZNF503Q96F45 646 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 TMEM256-PLSCR3K7ERE1 68 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 COL4A6Q14031 1691 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 TRBV7-3A0A075B6L6 115 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 DAND5Q8N907 189 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 PTH2Q96A98 100 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 WDR81Q562E7 1941 aa10.06□□□□□ -0.8
RNF43-208ENST00000584437 A0A0J9YY99 117 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 NDUFB1O75438 58 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 DEFB112Q30KQ8 113 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 SPRNQ5BIV9 151 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.05□□□□□ -0.88e-8■■■□□ 18.9
RNF43-208ENST00000584437 RIF1Q5UIP0 2472 aaKnown RBP10.05□□□□□ -0.8
RNF43-208ENST00000584437 Q8N9W7 124 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 TCL1BO95988 128 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 GYPEP15421 78 aa10.05□□□□□ -0.8
RNF43-208ENST00000584437 IGHV4-59P01825 116 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 P0C879 139 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 CCL24O00175 119 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
RNF43-208ENST00000584437 MIAQ16674 131 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 RNF183Q96D59 192 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 NACAE9PAV3 2078 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
RNF43-208ENST00000584437 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
RNF43-208ENST00000584437 IGHV3-30-3P0DP02 117 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 TICRRQ7Z2Z1 1910 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 SPATA25Q9BR10 227 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 IGLV2-8P01709 118 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 CGB3P0DN86 165 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 UQCRQO14949 82 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
RNF43-208ENST00000584437 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
RNF43-208ENST00000584437 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
RNF43-208ENST00000584437 C5orf56Q8N8D9 126 aa10.02□□□□□ -0.81
RNF43-208ENST00000584437 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
RNF43-208ENST00000584437 NDUFA1O15239 70 aa10.02□□□□□ -0.81
RNF43-208ENST00000584437 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.81
RNF43-208ENST00000584437 NBASA2RRP1 2371 aa10.01□□□□□ -0.81
RNF43-208ENST00000584437 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
RNF43-208ENST00000584437 MIR7-3HGQ8N6C7 128 aa10.01□□□□□ -0.81
RNF43-208ENST00000584437 GPR179Q6PRD1 2367 aa10.01□□□□□ -0.81
RNF43-208ENST00000584437 DIRC1Q969H9 104 aa10.01□□□□□ -0.81
RNF43-208ENST00000584437 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
RNF43-208ENST00000584437 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
RNF43-208ENST00000584437 GPHB5Q86YW7 130 aa10.01□□□□□ -0.81
RNF43-208ENST00000584437 SLURP1P55000 103 aa10□□□□□ -0.81
RNF43-208ENST00000584437 GTF3C1Q12789 2109 aa10□□□□□ -0.81
RNF43-208ENST00000584437 TMEM89A2RUT3 159 aa10□□□□□ -0.81
RNF43-208ENST00000584437 PRB1P04280 392 aa10□□□□□ -0.81
RNF43-208ENST00000584437 CGB7P0DN87 165 aa10□□□□□ -0.81
RNF43-208ENST00000584437 MT-ATP8P03928 68 aa10□□□□□ -0.81
RNF43-208ENST00000584437 IGLV10-54A0A075B6I4 117 aa10□□□□□ -0.81
RNF43-208ENST00000584437 ANAPC1Q9H1A4 1944 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 IGKV1D-37A0A075B6S9 117 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 E7EUB6 86 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 MED13Q9UHV7 2174 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 NFE4Q86UQ8 179 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 MLST8Q9BVC4 326 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 HIST2H2BDQ6DRA6 164 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 MBD6Q96DN6 1003 aa9.99□□□□□ -0.81
RNF43-208ENST00000584437 NCR3O14931 201 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 DKK4Q9UBT3 224 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 BLCAPP62952 87 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 DENND4AQ7Z401 1863 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 TRBV12-3P01733 135 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 TIRAPP58753 221 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 Q9HAA7 133 aa9.98□□□□□ -0.81
RNF43-208ENST00000584437 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
RNF43-208ENST00000584437 PCNX1Q96RV3 2341 aa9.97□□□□□ -0.81
RNF43-208ENST00000584437 LINC00322Q6ZN03 302 aaPredicted RBP9.97□□□□□ -0.81
RNF43-208ENST00000584437 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
RNF43-208ENST00000584437 SPAG11BQ08648 103 aa9.96□□□□□ -0.81
RNF43-208ENST00000584437 FANCD2OSQ96PS1 177 aa9.96□□□□□ -0.81
RNF43-208ENST00000584437 NCKAP5O14513 1909 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms