RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DEFB124Q8NES8 71 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 NPBQ8NG41 125 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 IFI27L1Q96BM0 104 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 PRELID3AQ96N28 172 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 AP1S3Q96PC3 154 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 CNFNQ9BYD5 112 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 DHRS4-AS1Q9P1J3 65 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 Q9UF83 564 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 SPTBN2O15020 2390 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 DYSFO75923 2080 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 DSCAMO60469 2012 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 ZFYVE26Q68DK2 2539 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 TANC2Q9HCD6 1990 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 GPR179Q6PRD1 2367 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 TRAV8-1A0A0A6YYK1 113 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 SPAARA0A1B0GVQ0 90 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 A0A1W2PRF3 423 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 A0A1W2PRM7 423 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 D6R8Y8 96 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 F8W1H4 67 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 H3BUT2 72 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 K7EIM0 57 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 ENSAO43768 121 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 NDUFA3O95167 84 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 S100A7P31151 101 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 CCL8P80075 99 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 LOXL1Q08397 574 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 PLGLAQ15195 96 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 KLF17Q5JT82 389 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 LY6G5BQ8NDX9 201 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 FAM57AQ8TBR7 257 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 RNASE6Q93091 150 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 RASL11BQ9BPW5 248 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 NXT2Q9NPJ8 142 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 PRR14LQ5THK1 2151 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 ITPR1Q14643 2758 aa2.75□□□□□ -1.97
SMCHD1-208ENST00000583344 CACNA1DQ01668 2161 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 ASH1LQ9NR48 2969 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 RAI1Q7Z5J4 1906 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 OTOGLQ3ZCN5 2332 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 FASNP49327 2511 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 IGLV2-18A0A075B6J9 118 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 CENPVL3A0A0U1RRI6 287 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 TMEM213A2RRL7 107 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 RBAKDNA6NC62 111 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 FABP5P3A8MUU1 101 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 J3QKU1 62 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 ZNF207O43670 478 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 SH2D1AO60880 128 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 NPYP01303 97 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 FABP2P12104 132 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 RPL7P18124 248 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 CNTFRP26992 372 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 CKS2P33552 79 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 CACNG7P62955 275 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 EBI3Q14213 229 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 FOXI2Q6ZQN5 318 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 AMN1Q8IY45 258 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 CEND1Q8N111 149 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 TTC9CQ8N5M4 171 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 Q8N8P6 123 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 OR11H6Q8NGC7 330 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 OR8A1Q8NGG7 326 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 RNF185Q96GF1 192 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 SIGMAR1Q99720 223 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 TP73-AS1Q9UF72 201 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 SPCS1Q9Y6A9 102 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 FRYQ5TBA9 3013 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 MAST4O15021 2626 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 CEP295Q9C0D2 2601 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 NBEAQ8NFP9 2946 aa2.74□□□□□ -1.97
SMCHD1-208ENST00000583344 DIDO1Q9BTC0 2240 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 IGLV11-55A0A075B6I3 123 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 TRBV25-1A0A075B6N4 114 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 IGHV3-72A0A0B4J1Y9 119 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 TRAV12-1A0A0B4J245 112 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 LOC389332A0A1B0GUA5 103 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 RBMY1BA6NDE4 496 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 RBMY1EA6NEQ0 496 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 LYRM9A8MSI8 78 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 OOSP1A8MZH6 123 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 IGLL5B9A064 214 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 K7EMI3 77 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 K7ENP7 123 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 SNAI2O43623 268 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 DPM2O94777 84 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 IGKCP01834 107 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 RBMY1DP0C7P1 496 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 RBMY1A1P0DJD3 496 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 UCNP55089 124 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 DEFB109BQ30KR1 87 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 PCP2Q8IVA1 136 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 MYOZ3Q8TDC0 251 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 CCL17Q92583 94 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 FBXL15Q9H469 300 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 MAP1LC3AQ9H492 121 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 DPM3Q9P2X0 92 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 V9GYY9 64 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 SPEGQ15772 3267 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 AKAP13Q12802 2813 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms