RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 IGHV3-33P01772 117 aa14.95□□□□□ -0.02
CASC3-207ENST00000581849 IGHV3-30-3P0DP02 117 aa14.95□□□□□ -0.02
CASC3-207ENST00000581849 IGHV3-30-5P0DP03 117 aa14.95□□□□□ -0.02
CASC3-207ENST00000581849 ZFP82Q8N141 532 aa14.95□□□□□ -0.02
CASC3-207ENST00000581849 FAM213BQ8TBF2 198 aa14.95□□□□□ -0.02
CASC3-207ENST00000581849 TM2D2Q9BX73 214 aa14.95□□□□□ -0.02
CASC3-207ENST00000581849 PFDN1O60925 122 aa14.94□□□□□ -0.02
CASC3-207ENST00000581849 CXCL1P09341 107 aa14.94□□□□□ -0.02
CASC3-207ENST00000581849 GCSHP23434 173 aa14.94□□□□□ -0.02
CASC3-207ENST00000581849 XGP55808 180 aa14.94□□□□□ -0.02
CASC3-207ENST00000581849 KRTAP10-1P60331 282 aa14.94□□□□□ -0.02
CASC3-207ENST00000581849 C14orf178Q8N769 122 aaPredicted RBP14.94□□□□□ -0.02
CASC3-207ENST00000581849 ZNF471Q9BX82 626 aaPredicted RBP14.94□□□□□ -0.02
CASC3-207ENST00000581849 TOR2AQ5JU69 321 aa14.93□□□□□ -0.02
CASC3-207ENST00000581849 Q9HAA7 133 aa14.93□□□□□ -0.02
CASC3-207ENST00000581849 TRAV8-3A0A0A6YYJ7 113 aa14.92□□□□□ -0.02
CASC3-207ENST00000581849 TRBV10-1A0A0K0K1A3 114 aa14.92□□□□□ -0.02
CASC3-207ENST00000581849 FAM74A4Q5TZK3 123 aa14.92□□□□□ -0.02
CASC3-207ENST00000581849 EPM2AB3EWF7 344 aa14.91□□□□□ -0.02
CASC3-207ENST00000581849 Q8N814 137 aa14.91□□□□□ -0.02
CASC3-207ENST00000581849 MLST8Q9BVC4 326 aa14.91□□□□□ -0.02
CASC3-207ENST00000581849 Q9UF83 564 aa14.91□□□□□ -0.02
CASC3-207ENST00000581849 TMSB15BA0A087X1C1 80 aa14.9□□□□□ -0.02
CASC3-207ENST00000581849 IGLV5-52A0A0A0MRZ9 124 aa14.9□□□□□ -0.02
CASC3-207ENST00000581849 M0R381 172 aa14.9□□□□□ -0.02
CASC3-207ENST00000581849 H2AFB1P0C5Y9 115 aa14.9□□□□□ -0.02
CASC3-207ENST00000581849 A0A087WWL8 130 aa14.89□□□□□ -0.03
CASC3-207ENST00000581849 SCO2A0A1W2PP80 73 aa14.89□□□□□ -0.03
CASC3-207ENST00000581849 TMEM70Q9BUB7 260 aa14.89□□□□□ -0.03
CASC3-207ENST00000581849 BAGE2Q86Y30 109 aa14.88□□□□□ -0.03
CASC3-207ENST00000581849 COX11Q9Y6N1 276 aa14.88□□□□□ -0.03
CASC3-207ENST00000581849 RPL36AP83881 106 aaKnown RBP14.87□□□□□ -0.03
CASC3-207ENST00000581849 RPL36ALQ969Q0 106 aaKnown RBP14.87□□□□□ -0.03
CASC3-207ENST00000581849 CHCHD7Q9BUK0 85 aa14.87□□□□□ -0.03
CASC3-207ENST00000581849 A0A1B0GV50 99 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 SNAI2O43623 268 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 TMUB2Q71RG4 321 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 Q8N3U1 123 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 OR10G8Q8NGN5 311 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 SSBP4Q9BWG4 385 aaPredicted RBP14.86□□□□□ -0.03
CASC3-207ENST00000581849 MANBALQ9NQG1 85 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 URGCP-MRPS24S4R325 110 aa14.86□□□□□ -0.03
CASC3-207ENST00000581849 TRBV7-3A0A075B6L6 115 aa14.85□□□□□ -0.03
CASC3-207ENST00000581849 TRAV1-1A0A0B4J248 108 aa14.85□□□□□ -0.03
CASC3-207ENST00000581849 RAB5CP51148 216 aa14.85□□□□□ -0.03
CASC3-207ENST00000581849 RAB4BP61018 213 aa14.85□□□□□ -0.03
CASC3-207ENST00000581849 DAZ4Q86SG3 579 aaKnown RBP14.85□□□□□ -0.03
CASC3-207ENST00000581849 NIT1Q86X76 327 aa14.85□□□□□ -0.03
CASC3-207ENST00000581849 FRZBQ92765 325 aa14.85□□□□□ -0.03
CASC3-207ENST00000581849 DAZ3Q9NR90 486 aaKnown RBP14.85□□□□□ -0.03
CASC3-207ENST00000581849 FAT1Q14517 4588 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 C1QBP02746 253 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 OR5AL1P0C617 328 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 UBE2D3P61077 147 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 UBE2D2P62837 147 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 EIF5AL1Q6IS14 154 aaKnown RBP14.84□□□□□ -0.03
CASC3-207ENST00000581849 C11orf52Q96A22 123 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 RMI2Q96E14 147 aa14.84□□□□□ -0.03
CASC3-207ENST00000581849 RPL19P84098 196 aaKnown RBP14.83□□□□□ -0.04
CASC3-207ENST00000581849 OR10AG1Q8NH19 301 aa14.83□□□□□ -0.04
CASC3-207ENST00000581849 ELOBQ15370 118 aa14.82□□□□□ -0.04
CASC3-207ENST00000581849 PRR27Q6MZM9 219 aa14.82□□□□□ -0.04
CASC3-207ENST00000581849 TEX46H3BTG2 121 aa14.81□□□□□ -0.04
CASC3-207ENST00000581849 RPL35P42766 123 aaKnown RBP14.81□□□□□ -0.04
CASC3-207ENST00000581849 Q5VSD8 79 aa14.81□□□□□ -0.04
CASC3-207ENST00000581849 A0A087WX48 190 aa14.79□□□□□ -0.04
CASC3-207ENST00000581849 ZNF56Q15929 161 aa14.79□□□□□ -0.04
CASC3-207ENST00000581849 SPANXN1Q5VSR9 72 aa14.79□□□□□ -0.04
CASC3-207ENST00000581849 KCNIP4Q6PIL6 250 aa14.79□□□□□ -0.04
CASC3-207ENST00000581849 SMIM12Q96EX1 92 aa14.79□□□□□ -0.04
CASC3-207ENST00000581849 GNG13Q9P2W3 67 aa14.79□□□□□ -0.04
CASC3-207ENST00000581849 WFDC2Q14508 124 aa14.78□□□□□ -0.04
CASC3-207ENST00000581849 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.78□□□□□ -0.04
CASC3-207ENST00000581849 NEXN-AS1Q8NBZ9 246 aa14.78□□□□□ -0.04
CASC3-207ENST00000581849 TRBV6-8A0A0A6YYG3 113 aa14.77□□□□□ -0.05
CASC3-207ENST00000581849 CCL20P78556 96 aa14.77□□□□□ -0.05
CASC3-207ENST00000581849 ATRAIDQ6UW56 229 aa14.77□□□□□ -0.05
CASC3-207ENST00000581849 KLK12Q9UKR0 248 aa14.77□□□□□ -0.05
CASC3-207ENST00000581849 VPS13BQ7Z7G8 4022 aa14.77□□□□□ -0.05
CASC3-207ENST00000581849 DNAH8Q96JB1 4490 aa14.77□□□□□ -0.05
CASC3-207ENST00000581849 INAFM2P0DMQ5 153 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 SULT1A2P50226 295 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 PKIAP61925 76 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 Q0VG73 95 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 TCTE3Q8IZS6 198 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 AP1S3Q96PC3 154 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 DERL1Q9BUN8 251 aa14.76□□□□□ -0.05
CASC3-207ENST00000581849 RBFOX3A6NFN3 312 aa14.75□□□□□ -0.05
CASC3-207ENST00000581849 RPS20P60866 119 aaKnown RBP14.75□□□□□ -0.05
CASC3-207ENST00000581849 TMEM97Q5BJF2 176 aa14.75□□□□□ -0.05
CASC3-207ENST00000581849 CENPWQ5EE01 88 aa14.75□□□□□ -0.05
CASC3-207ENST00000581849 IGKV2D-24A0A075B6R9 120 aa14.74□□□□□ -0.05
CASC3-207ENST00000581849 FAM229AH3BQW9 127 aa14.74□□□□□ -0.05
CASC3-207ENST00000581849 PDE6DO43924 150 aa14.74□□□□□ -0.05
CASC3-207ENST00000581849 SMIM17P0DL12 118 aa14.74□□□□□ -0.05
CASC3-207ENST00000581849 Q8N976 141 aa14.74□□□□□ -0.05
CASC3-207ENST00000581849 KIF25-AS1Q9Y6Z4 181 aa14.74□□□□□ -0.05
CASC3-207ENST00000581849 IFNA1P01562 189 aa14.73□□□□□ -0.05
CASC3-207ENST00000581849 IGLV2-8P01709 118 aa14.73□□□□□ -0.05
CASC3-207ENST00000581849 IGLC6P0CF74 106 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms