RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 UFSP1Q6NVU6 142 aa11.75□□□□□ -0.53
MKS1-209ENST00000580127 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.75□□□□□ -0.53
MKS1-209ENST00000580127 RPL36ALQ969Q0 106 aaKnown RBP11.75□□□□□ -0.53
MKS1-209ENST00000580127 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
MKS1-209ENST00000580127 TRBV10-1A0A0K0K1A3 114 aa11.74□□□□□ -0.53
MKS1-209ENST00000580127 TPT1P13693 172 aaKnown RBP11.74□□□□□ -0.53
MKS1-209ENST00000580127 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
MKS1-209ENST00000580127 JPT2Q9H910 190 aa11.74□□□□□ -0.53
MKS1-209ENST00000580127 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
MKS1-209ENST00000580127 BORCS7-ASMTA0A0B4J1R7 106 aa11.73□□□□□ -0.53
MKS1-209ENST00000580127 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
MKS1-209ENST00000580127 H3BVH4 76 aa11.73□□□□□ -0.53
MKS1-209ENST00000580127 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
MKS1-209ENST00000580127 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
MKS1-209ENST00000580127 KRBOX1C9JBD0 128 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 FAM162BQ5T6X4 162 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 C1orf43Q9BWL3 253 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 Q9UF83 564 aa11.72□□□□□ -0.53
MKS1-209ENST00000580127 TRBV7-3A0A075B6L6 115 aa11.71□□□□□ -0.53
MKS1-209ENST00000580127 M0R036 132 aa11.71□□□□□ -0.53
MKS1-209ENST00000580127 PEX7O00628 323 aa11.71□□□□□ -0.53
MKS1-209ENST00000580127 PKIAP61925 76 aa11.71□□□□□ -0.53
MKS1-209ENST00000580127 A0A087WWL8 130 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 CRPP02741 224 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 UBE2G1P62253 170 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 ATRAIDQ6UW56 229 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 ZFP82Q8N141 532 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
MKS1-209ENST00000580127 GRIFINA4D1Z8 144 aa11.69□□□□□ -0.54
MKS1-209ENST00000580127 A6NHS1 94 aa11.69□□□□□ -0.54
MKS1-209ENST00000580127 M0R381 172 aa11.69□□□□□ -0.54
MKS1-209ENST00000580127 UBE2G2P60604 165 aa11.69□□□□□ -0.54
MKS1-209ENST00000580127 Q86TA4 180 aa11.69□□□□□ -0.54
MKS1-209ENST00000580127 MED28Q9H204 178 aa11.69□□□□□ -0.54
MKS1-209ENST00000580127 COX8CQ7Z4L0 72 aa11.68□□□□□ -0.54
MKS1-209ENST00000580127 ZC2HC1AQ96GY0 325 aa11.68□□□□□ -0.54
MKS1-209ENST00000580127 SH2D1AO60880 128 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 RAB4BP61018 213 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 UBE2D3P61077 147 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 UBE2D2P62837 147 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 AKR1C8PQ5T2L2 129 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 TCEAL7Q9BRU2 100 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 PLA2G2DQ9UNK4 145 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 ALG5Q9Y673 324 aa11.67□□□□□ -0.54
MKS1-209ENST00000580127 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
MKS1-209ENST00000580127 FAM74A7A6NL05 159 aa11.66□□□□□ -0.54
MKS1-209ENST00000580127 CRIP1P50238 77 aa11.66□□□□□ -0.54
MKS1-209ENST00000580127 TMEM97Q5BJF2 176 aa11.66□□□□□ -0.54
MKS1-209ENST00000580127 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
MKS1-209ENST00000580127 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
MKS1-209ENST00000580127 TMSB15BA0A087X1C1 80 aa11.65□□□□□ -0.54
MKS1-209ENST00000580127 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
MKS1-209ENST00000580127 RPL37AP61513 92 aaKnown RBP11.65□□□□□ -0.54
MKS1-209ENST00000580127 ZNF674Q2M3X9 581 aa11.65□□□□□ -0.54
MKS1-209ENST00000580127 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
MKS1-209ENST00000580127 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
MKS1-209ENST00000580127 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
MKS1-209ENST00000580127 MIAQ16674 131 aa11.64□□□□□ -0.55
MKS1-209ENST00000580127 RPL7L1Q6DKI1 246 aaKnown RBP11.64□□□□□ -0.55
MKS1-209ENST00000580127 OR10G8Q8NGN5 311 aa11.64□□□□□ -0.55
MKS1-209ENST00000580127 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
MKS1-209ENST00000580127 TRBV6-1A0A0K0K1D8 114 aa11.63□□□□□ -0.55
MKS1-209ENST00000580127 FHITP49789 147 aa11.63□□□□□ -0.55
MKS1-209ENST00000580127 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
MKS1-209ENST00000580127 ENHOQ6UWT2 76 aa11.63□□□□□ -0.55
MKS1-209ENST00000580127 ZNF471Q9BX82 626 aaPredicted RBP11.63□□□□□ -0.55
MKS1-209ENST00000580127 USP17L23D6RBM5 183 aa11.62□□□□□ -0.55
MKS1-209ENST00000580127 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
MKS1-209ENST00000580127 KRTAP10-4P60372 401 aaPredicted RBP11.62□□□□□ -0.55
MKS1-209ENST00000580127 ZNF56Q15929 161 aa11.62□□□□□ -0.55
MKS1-209ENST00000580127 ZNF726P1Q15940 193 aa11.62□□□□□ -0.55
MKS1-209ENST00000580127 F5H697 171 aa11.61□□□□□ -0.55
MKS1-209ENST00000580127 PTTG1O95997 202 aa11.61□□□□□ -0.55
MKS1-209ENST00000580127 LTAP01374 205 aa11.61□□□□□ -0.55
MKS1-209ENST00000580127 HLA-DQA1P01909 254 aa11.61□□□□□ -0.55
MKS1-209ENST00000580127 GIPP09681 153 aaPredicted RBP11.61□□□□□ -0.55
MKS1-209ENST00000580127 MAP1LC3B2A6NCE7 125 aa11.6□□□□□ -0.55
MKS1-209ENST00000580127 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
MKS1-209ENST00000580127 AKR1C3P42330 323 aa11.6□□□□□ -0.55
MKS1-209ENST00000580127 CLRN3Q8NCR9 226 aa11.6□□□□□ -0.55
MKS1-209ENST00000580127 MAP1LC3BQ9GZQ8 125 aa11.6□□□□□ -0.55
MKS1-209ENST00000580127 DNAH8Q96JB1 4490 aa11.59□□□□□ -0.55
MKS1-209ENST00000580127 FXYD6-FXYD2A0A087WZ82 144 aa11.59□□□□□ -0.55
MKS1-209ENST00000580127 MPV17L2Q567V2 206 aa11.59□□□□□ -0.55
MKS1-209ENST00000580127 SPANXN1Q5VSR9 72 aa11.59□□□□□ -0.55
MKS1-209ENST00000580127 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
MKS1-209ENST00000580127 DPH3Q96FX2 82 aa11.59□□□□□ -0.55
MKS1-209ENST00000580127 A0A0D9SG52 128 aa11.58□□□□□ -0.56
MKS1-209ENST00000580127 RPL19P84098 196 aaKnown RBP11.58□□□□□ -0.56
MKS1-209ENST00000580127 C9orf163Q8N9P6 203 aa11.58□□□□□ -0.56
MKS1-209ENST00000580127 PRSS1P07477 247 aa11.57□□□□□ -0.56
MKS1-209ENST00000580127 CXCL1P09341 107 aa11.57□□□□□ -0.56
MKS1-209ENST00000580127 Q5BKY6 102 aa11.57□□□□□ -0.56
MKS1-209ENST00000580127 PRR27Q6MZM9 219 aa11.57□□□□□ -0.56
MKS1-209ENST00000580127 TRBV25-1A0A075B6N4 114 aa11.56□□□□□ -0.56
MKS1-209ENST00000580127 DERL1Q9BUN8 251 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms