RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 SPANXN1Q5VSR9 72 aa12.82□□□□□ -0.36
NEK4P2-201ENST00000580004 OCC1Q8TAD7 63 aa12.82□□□□□ -0.36
NEK4P2-201ENST00000580004 SAMD10Q9BYL1 202 aa12.82□□□□□ -0.36
NEK4P2-201ENST00000580004 DNAH17Q9UFH2 4485 aa12.82□□□□□ -0.36
NEK4P2-201ENST00000580004 HECTD4Q9Y4D8 3996 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 LOC100131303A0A0U1RQF7 123 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 FAM74A4Q5TZK3 123 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
NEK4P2-201ENST00000580004 RTL8CO15255 209 aa12.8□□□□□ -0.36
NEK4P2-201ENST00000580004 CACNG7P62955 275 aa12.8□□□□□ -0.36
NEK4P2-201ENST00000580004 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
NEK4P2-201ENST00000580004 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
NEK4P2-201ENST00000580004 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
NEK4P2-201ENST00000580004 K7EN84 100 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 RAB4BP61018 213 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 Q6ZSN1 163 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 FAM231DQ6ZW35 169 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 AP1S3Q96PC3 154 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 SMIM7Q9BQ49 75 aa12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 RPP21Q9H633 154 aaKnown RBP12.79□□□□□ -0.36
NEK4P2-201ENST00000580004 TRAV9-2A0A087WT02 112 aa12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 A0A087WWL8 130 aa12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 SRP19P09132 144 aaKnown RBP12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 FAM74A3Q4VXF1 159 aa12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 WDR73Q6P4I2 378 aa12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 ATP6V0E2Q8NHE4 81 aa12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 GTSF1LQ9H1H1 148 aa12.78□□□□□ -0.36
NEK4P2-201ENST00000580004 DNAH10OSP0CZ25 163 aa12.77□□□□□ -0.37
NEK4P2-201ENST00000580004 BIRC6Q9NR09 4857 aa12.77□□□□□ -0.37
NEK4P2-201ENST00000580004 PRSS29PA6NIE9 313 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 GZMBP10144 247 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 CTRLP40313 264 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 CEBPGP53567 150 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 PEA15Q15121 130 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 CT83Q5H943 113 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 LELP1Q5T871 98 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 CNFNQ9BYD5 112 aa12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
NEK4P2-201ENST00000580004 A0A087WWC5 75 aa12.75□□□□□ -0.37
NEK4P2-201ENST00000580004 TRAV8-6A0A0B4J262 113 aa12.75□□□□□ -0.37
NEK4P2-201ENST00000580004 OR10G8Q8NGN5 311 aa12.75□□□□□ -0.37
NEK4P2-201ENST00000580004 TPPP3Q9BW30 176 aa12.75□□□□□ -0.37
NEK4P2-201ENST00000580004 KRTAP1-5Q9BYS1 174 aa12.75□□□□□ -0.37
NEK4P2-201ENST00000580004 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 TRGC1P0CF51 173 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 EVI2AP22794 236 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 GAGE1Q13065 139 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 GAGE4Q13068 117 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 GAGE5Q13069 117 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 LINC01551Q86U37 167 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 WFDC10BQ8IUB3 73 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 C10orf126Q8N4M7 172 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
NEK4P2-201ENST00000580004 A8MWL6 223 aa12.73□□□□□ -0.37
NEK4P2-201ENST00000580004 GATCO43716 136 aaKnown RBP12.73□□□□□ -0.37
NEK4P2-201ENST00000580004 ZNF56Q15929 161 aa12.73□□□□□ -0.37
NEK4P2-201ENST00000580004 LYZL1Q6UWQ5 148 aa12.73□□□□□ -0.37
NEK4P2-201ENST00000580004 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 MUC21A0A0G2JKD1 596 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 MUC21A0A140T8X8 626 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 ERVFC1-1P60608 527 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 LINC01556Q5JQF7 62 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
NEK4P2-201ENST00000580004 A0A1B0GVY2 172 aa12.71□□□□□ -0.37
NEK4P2-201ENST00000580004 FAM231BA6NCW3 169 aa12.71□□□□□ -0.37
NEK4P2-201ENST00000580004 FOXA3P55318 350 aaPredicted RBP12.71□□□□□ -0.37
NEK4P2-201ENST00000580004 RAB14P61106 215 aa12.71□□□□□ -0.37
NEK4P2-201ENST00000580004 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
NEK4P2-201ENST00000580004 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
NEK4P2-201ENST00000580004 H7C1H1 209 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 NTF3P20783 257 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 LINC00315P59091 139 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 UBE2D3P61077 147 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 UBE2D2P62837 147 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 TMEM241Q24JQ0 296 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
NEK4P2-201ENST00000580004 PKD1P98161 4303 aa12.69□□□□□ -0.38
NEK4P2-201ENST00000580004 F5H697 171 aa12.69□□□□□ -0.38
NEK4P2-201ENST00000580004 C15orf54Q8N8G6 183 aa12.69□□□□□ -0.38
NEK4P2-201ENST00000580004 DPH3P1Q9H4G8 78 aa12.69□□□□□ -0.38
NEK4P2-201ENST00000580004 Q9UF83 564 aa12.69□□□□□ -0.38
NEK4P2-201ENST00000580004 NAT8Q9UHE5 227 aa12.69□□□□□ -0.38
NEK4P2-201ENST00000580004 SSTP61278 116 aa12.68□□□□□ -0.38
NEK4P2-201ENST00000580004 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
NEK4P2-201ENST00000580004 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
NEK4P2-201ENST00000580004 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
NEK4P2-201ENST00000580004 TMEM97Q5BJF2 176 aa12.67□□□□□ -0.38
NEK4P2-201ENST00000580004 TSKUQ8WUA8 353 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms