RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF415Q09FC8 603 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 LGALS9BQ3B8N2 356 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 KCNIP4Q6PIL6 250 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 NXPH4O95158 308 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 S100PP25815 95 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 CACNG7P62955 275 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 LYZL1Q6UWQ5 148 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 ATP5L2Q7Z4Y8 100 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 Q8NAQ8 132 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 RASL10AQ92737 203 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 GSN-AS1Q9NRJ2 163 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 PHLDA3Q9Y5J5 127 aa5.74□□□□□ -1.49
COPS3-215ENST00000578317 TIMM8BQ9Y5J9 83 aaPredicted RBP5.74□□□□□ -1.49
COPS3-215ENST00000578317 TRBV24-1A0A075B6N3 115 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 A0A1B0GUT8 65 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 A0A1B0GW15 77 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 SNURFLB1AK76 121 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 H3BVH4 76 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 M0R2P5 195 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 SPINK4O60575 86 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 ELOBQ15370 118 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 SERTAD4-AS1Q5TG53 156 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 RASL11AQ6T310 242 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 YPEL4Q96NS1 127 aa5.73□□□□□ -1.49
COPS3-215ENST00000578317 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 LYRM9A8MSI8 78 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 NTF3P20783 257 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 RIGQ13278 110 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 ZNF876PQ49A33 203 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 ZFP82Q8N141 532 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 LINC00612Q8N6U2 182 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 OR10AG1Q8NH19 301 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 BORCS7Q96B45 105 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 C18orf15Q96N68 181 aa5.72□□□□□ -1.49
COPS3-215ENST00000578317 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
COPS3-215ENST00000578317 A0A1B0GXF2 115 aa5.71□□□□□ -1.5
COPS3-215ENST00000578317 SPANXN1Q5VSR9 72 aa5.71□□□□□ -1.5
COPS3-215ENST00000578317 TPPP3Q9BW30 176 aa5.71□□□□□ -1.5
COPS3-215ENST00000578317 NOP10Q9NPE3 64 aaKnown RBP5.71□□□□□ -1.5
COPS3-215ENST00000578317 URGCP-MRPS24S4R325 110 aa5.71□□□□□ -1.5
COPS3-215ENST00000578317 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 TEX48A0A1B0GUV7 120 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 CIDEAO60543 219 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 S100A8P05109 93 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 TWIST1Q15672 202 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 COX19Q49B96 90 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 CBLN2Q8IUK8 224 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 GATD1Q8NB37 220 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 COLCA2A8K830 154 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 A8MWV9 139 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 M0R381 172 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 SPART-AS1P0CW21 52 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 FOXI1Q12951 378 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 TMEM191AQ9H0A3 160 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 RETNQ9HD89 108 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 MSRB1Q9NZV6 116 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 TENM3Q9P273 2699 aa5.7□□□□□ -1.5
COPS3-215ENST00000578317 TRGV1A0A0A0MS02 117 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 SCO1O75880 301 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 CRYGDP07320 174 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 EMP1P54849 157 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 HBBP68871 147 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 ZFP2Q6ZN57 461 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 Q6ZTI0 123 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 SMIM15Q7Z3B0 74 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 FRZBQ92765 325 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 FAM210BQ96KR6 192 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 GNB1LQ9BYB4 327 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
COPS3-215ENST00000578317 STAB2Q8WWQ8 2551 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 MUC21A0A0G2JKD1 596 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 MUC21A0A140T8X8 626 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 USP17L23D6RBM5 183 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 RS1O15537 224 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 EVI2AP22794 236 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 LINC00315P59091 139 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 KRTAP10-2P60368 255 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 FAM222AQ5U5X8 452 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 CFAP126Q5VTH2 177 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 MRPL54Q6P161 138 aaKnown RBP5.68□□□□□ -1.5
COPS3-215ENST00000578317 POM121L12Q8N7R1 296 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 AP1S3Q96PC3 154 aa5.68□□□□□ -1.5
COPS3-215ENST00000578317 MRPL16Q9NX20 251 aaKnown RBP5.68□□□□□ -1.5
COPS3-215ENST00000578317 TRAV4A0A0B4J268 109 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 DEFB4AO15263 64 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 MT-ND6P03923 174 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 CAMPP49913 170 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 SSTP61278 116 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 FAM104BQ5XKR9 115 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 UFSP1Q6NVU6 142 aa5.67□□□□□ -1.5
COPS3-215ENST00000578317 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 A0A0J9YWU9 116 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 RHODO00212 210 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 GAGE7O76087 117 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms