RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
SF3B3-215ENST00000577085 MAPKAPK5-AS1Q8N8E1 139 aa10.48□□□□□ -0.73
SF3B3-215ENST00000577085 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
SF3B3-215ENST00000577085 Q9HAA7 133 aa10.48□□□□□ -0.73
SF3B3-215ENST00000577085 A0A087WTM6 91 aa10.47□□□□□ -0.73
SF3B3-215ENST00000577085 A0A087WWC5 75 aa10.47□□□□□ -0.73
SF3B3-215ENST00000577085 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-215ENST00000577085 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
SF3B3-215ENST00000577085 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
SF3B3-215ENST00000577085 IBA57-AS1B1ANH7 110 aa10.46□□□□□ -0.73
SF3B3-215ENST00000577085 RPL35P42766 123 aaKnown RBP10.46□□□□□ -0.73
SF3B3-215ENST00000577085 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.73
SF3B3-215ENST00000577085 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
SF3B3-215ENST00000577085 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.73
SF3B3-215ENST00000577085 TRAV1-1A0A0B4J248 108 aa10.45□□□□□ -0.74
SF3B3-215ENST00000577085 IFNA1P01562 189 aa10.45□□□□□ -0.74
SF3B3-215ENST00000577085 RPL19P84098 196 aaKnown RBP10.45□□□□□ -0.74
SF3B3-215ENST00000577085 SPANXN1Q5VSR9 72 aa10.45□□□□□ -0.74
SF3B3-215ENST00000577085 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
SF3B3-215ENST00000577085 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
SF3B3-215ENST00000577085 CCL20P78556 96 aa10.44□□□□□ -0.74
SF3B3-215ENST00000577085 RPL36AP83881 106 aaKnown RBP10.44□□□□□ -0.74
SF3B3-215ENST00000577085 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
SF3B3-215ENST00000577085 RPL36ALQ969Q0 106 aaKnown RBP10.44□□□□□ -0.74
SF3B3-215ENST00000577085 MLST8Q9BVC4 326 aa10.44□□□□□ -0.74
SF3B3-215ENST00000577085 RYR1P21817 5038 aa10.44□□□□□ -0.74
SF3B3-215ENST00000577085 TRBV10-1A0A0K0K1A3 114 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 CXCL1P09341 107 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 SULT1A2P50226 295 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 SSTP61278 116 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 LAGE3Q14657 143 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 ZNF56Q15929 161 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 SLC51BQ86UW2 128 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-215ENST00000577085 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
SF3B3-215ENST00000577085 PDE6DO43924 150 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 C1QBP02746 253 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 GNG4P50150 75 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 MEF2BQ02080 365 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-215ENST00000577085 CENPWQ5EE01 88 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 OR10AG1Q8NH19 301 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 C11orf52Q96A22 123 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 Q9UF83 564 aa10.42□□□□□ -0.74
SF3B3-215ENST00000577085 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
SF3B3-215ENST00000577085 F5H697 171 aa10.41□□□□□ -0.74
SF3B3-215ENST00000577085 RAB4BP61018 213 aa10.41□□□□□ -0.74
SF3B3-215ENST00000577085 AKAP14Q86UN6 197 aa10.41□□□□□ -0.74
SF3B3-215ENST00000577085 DERL1Q9BUN8 251 aa10.41□□□□□ -0.74
SF3B3-215ENST00000577085 TPPP3Q9BW30 176 aa10.41□□□□□ -0.74
SF3B3-215ENST00000577085 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 A0A087WX48 190 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 OR5AL1P0C617 328 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 MED9Q9NWA0 146 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.74
SF3B3-215ENST00000577085 hCG_2014768A0A024R1R8 64 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 SNAI2O43623 268 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 GCSHP23434 173 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 RPS20P60866 119 aaKnown RBP10.39□□□□□ -0.75
SF3B3-215ENST00000577085 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
SF3B3-215ENST00000577085 Q8N3U1 123 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 AP1S3Q96PC3 154 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 BIN3Q9NQY0 253 aa10.39□□□□□ -0.75
SF3B3-215ENST00000577085 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
SF3B3-215ENST00000577085 BCL2P10415 239 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
SF3B3-215ENST00000577085 Q6ZNX1 250 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 Q8N1X5 172 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 OR2D3Q8NGH3 330 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-215ENST00000577085 RMI2Q96E14 147 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 SSBP4Q9BWG4 385 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-215ENST00000577085 VAX2Q9UIW0 290 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 HSPG2P98160 4391 aa10.38□□□□□ -0.75
SF3B3-215ENST00000577085 RAB19A4D1S5 217 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 P01737 135 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 UBE2D3P61077 147 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 UBE2D2P62837 147 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 ELOBQ15370 118 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 FER1L6-AS1Q8NA97 138 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
SF3B3-215ENST00000577085 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
SF3B3-215ENST00000577085 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
SF3B3-215ENST00000577085 NIT1Q86X76 327 aa10.36□□□□□ -0.75
SF3B3-215ENST00000577085 Q8N814 137 aa10.36□□□□□ -0.75
SF3B3-215ENST00000577085 OR10G8Q8NGN5 311 aa10.36□□□□□ -0.75
SF3B3-215ENST00000577085 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
SF3B3-215ENST00000577085 MGPP08493 103 aa10.35□□□□□ -0.75
SF3B3-215ENST00000577085 GZMBP10144 247 aa10.35□□□□□ -0.75
SF3B3-215ENST00000577085 CACNG7P62955 275 aa10.35□□□□□ -0.75
SF3B3-215ENST00000577085 NEXN-AS1Q8NBZ9 246 aa10.35□□□□□ -0.75
SF3B3-215ENST00000577085 CHCHD7Q9BUK0 85 aa10.35□□□□□ -0.75
SF3B3-215ENST00000577085 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms