RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	FAM159A	Q6UWV7	190 aa		11.15	□□□□□ -0.62
PRPF8-216	ENST00000577001	BEX4	Q9NWD9	120 aa	Predicted RBP	11.15	□□□□□ -0.63
PRPF8-216	ENST00000577001	CEND1	Q8N111	149 aa		11.14	□□□□□ -0.63
PRPF8-216	ENST00000577001	FLNA	P21333	2647 aa	Known RBP	11.14	□□□□□ -0.63
PRPF8-216	ENST00000577001	TRAV21	A0A0B4J279	112 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001		A0A0U1RRA0	63 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	RNASE3	P12724	160 aa	Known RBP	11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	C12orf74	Q32Q52	190 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	ZFP2	Q6ZN57	461 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	UFSP1	Q6NVU6	142 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	PGPEP1	Q9NXJ5	209 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001		A0A087WX48	190 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	LINC01549	A6NIU2	74 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	ATP5L	O75964	103 aa		11.13	□□□□□ -0.63
PRPF8-216	ENST00000577001	IGHV3-16	A0A0C4DH30	117 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	PSMB2	P49721	201 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	RAB9A	P51151	201 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	BAALC	Q8WXS3	180 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	RAX2	Q96IS3	184 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	MRPL16	Q9NX20	251 aa	Known RBP	11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	IGHV3-38	A0A0C4DH36	116 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	IGLL5	B9A064	214 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	CLEC2A	Q6UVW9	174 aa		11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	ZNF48	Q96MX3	618 aa	Predicted RBP	11.12	□□□□□ -0.63
PRPF8-216	ENST00000577001	C11orf86	A6NJI1	115 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001	C9orf47	Q6ZRZ4	202 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001	DPH3P1	Q9H4G8	78 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001		A8MZ25	164 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001	DEFB112	Q30KQ8	113 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001	OOSP1	A8MZH6	123 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001	C1orf122	Q6ZSJ8	110 aa		11.11	□□□□□ -0.63
PRPF8-216	ENST00000577001		A0A1B0GWB2	263 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001	PSMG3-AS1	Q96PY0	264 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001	C9orf139	Q6ZV77	190 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001		A0A1W2PRX2	142 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001		F8VRH5	84 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001		H7C1H1	209 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001	SUMO4	Q6EEV6	95 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001	PIMREG	Q9BSJ6	248 aa		11.1	□□□□□ -0.63
PRPF8-216	ENST00000577001	AKAP9	Q99996	3911 aa		11.09	□□□□□ -0.63
PRPF8-216	ENST00000577001	SDHAF1	A6NFY7	115 aa		11.09	□□□□□ -0.63
PRPF8-216	ENST00000577001	USP24	Q9UPU5	2620 aa		11.09	□□□□□ -0.63
PRPF8-216	ENST00000577001	LGALS1	P09382	135 aa	Known RBP	11.09	□□□□□ -0.63
PRPF8-216	ENST00000577001	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001	GCN1	Q92616	2671 aa	Known RBP	11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001	NBPF19	A0A087WUL8	3843 aa		11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001	CNFN	Q9BYD5	112 aa		11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001	ITPR3	Q14573	2671 aa		11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001	TSPEAR-AS2	P59090	65 aa		11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001		Q8N1Y9	231 aa		11.08	□□□□□ -0.64
PRPF8-216	ENST00000577001	MYMX	A0A1B0GTQ4	84 aa		11.07	□□□□□ -0.64
PRPF8-216	ENST00000577001	SCGB1C2	P0DMR2	95 aa		11.07	□□□□□ -0.64
PRPF8-216	ENST00000577001	HIST2H2BC	Q6DN03	193 aa		11.07	□□□□□ -0.64
PRPF8-216	ENST00000577001	DAZ1	Q9NQZ3	744 aa	Known RBP	11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	TRAV2	A0A0B4J234	112 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	RNF223	E7ERA6	249 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	TSHB	P01222	138 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001		G3V4G9	280 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	PRSS2	P07478	247 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	ZNF876P	Q49A33	203 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	SPX	Q9BT56	116 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	ZMAT4	Q9H898	229 aa		11.06	□□□□□ -0.64
PRPF8-216	ENST00000577001	SLURP1	P55000	103 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	APRG1	Q8IVJ8	170 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	C20orf78	Q9BR46	151 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001		U3KQE9	123 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	RBAKDN	A6NC62	111 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	MSMB	P08118	114 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	UCN	P55089	124 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	SMPX	Q9UHP9	88 aa		11.05	□□□□□ -0.64
PRPF8-216	ENST00000577001	NDUFA4	O00483	81 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	HOXA3	O43365	443 aa	Predicted RBP	11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001		Q6ZSV7	163 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	CRYGD	P07320	174 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	NEXN-AS1	Q8NBZ9	246 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	TMEM190	Q8WZ59	177 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	ZNF625	Q96I27	306 aa	Predicted RBP	11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001		A0A0J9YXV3	536 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	AZU1	P20160	251 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	COX8C	Q7Z4L0	72 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	DAND5	Q8N907	189 aa		11.04	□□□□□ -0.64
PRPF8-216	ENST00000577001	OVOL1	O14753	267 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	ORMDL2	Q53FV1	153 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	ZNRF2	Q8NHG8	242 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	IGHV4OR15-8	A0A075B7B6	117 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001		A0A087WW49	117 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	TRAV8-3	A0A0A6YYJ7	113 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	IGHV3-53	P01767	116 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	HECTD1	Q9ULT8	2610 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	FAM223B	A6NKX1	122 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	SOCS3	O14543	225 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	KRTAP10-9	P60411	292 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	GAGE13	Q4V321	117 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001		Q5PR19	223 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	FAM223A	Q8IWN6	122 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	C10orf105	Q8TEF2	133 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	TOMM6	Q96B49	74 aa		11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	KIR2DL4	Q99706	377 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms