RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 OR2D3Q8NGH3 330 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 OR10AG1Q8NH19 301 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 SFRP2Q96HF1 295 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
SMG6-220ENST00000576218 BTF3P20290 206 aaKnown RBP10.43□□□□□ -0.74
SMG6-220ENST00000576218 TNP2Q05952 138 aa10.43□□□□□ -0.74
SMG6-220ENST00000576218 GTSF1LQ9H1H1 148 aa10.43□□□□□ -0.74
SMG6-220ENST00000576218 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
SMG6-220ENST00000576218 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
SMG6-220ENST00000576218 TIRAPP58753 221 aa10.42□□□□□ -0.74
SMG6-220ENST00000576218 Q6ZSN1 163 aa10.42□□□□□ -0.74
SMG6-220ENST00000576218 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
SMG6-220ENST00000576218 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
SMG6-220ENST00000576218 EIF5A2Q9GZV4 153 aaKnown RBP10.42□□□□□ -0.74
SMG6-220ENST00000576218 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
SMG6-220ENST00000576218 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 F5H697 171 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 K7EP13 123 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 CRYGDP07320 174 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 OR5AL1P0C617 328 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 LELP1Q5T871 98 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 NFE4Q86UQ8 179 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 FER1L6-AS1Q8NA97 138 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
SMG6-220ENST00000576218 SNAI2O43623 268 aa10.4□□□□□ -0.74
SMG6-220ENST00000576218 IGLV2-8P01709 118 aa10.4□□□□□ -0.74
SMG6-220ENST00000576218 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.74
SMG6-220ENST00000576218 GZMBP10144 247 aa10.4□□□□□ -0.74
SMG6-220ENST00000576218 TOR2AQ5JU69 321 aa10.4□□□□□ -0.74
SMG6-220ENST00000576218 UFSP1Q6NVU6 142 aa10.4□□□□□ -0.74
SMG6-220ENST00000576218 TRBV20OR9-2A0A075B6H5 130 aa10.39□□□□□ -0.75
SMG6-220ENST00000576218 EREGO14944 169 aa10.39□□□□□ -0.75
SMG6-220ENST00000576218 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
SMG6-220ENST00000576218 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.39□□□□□ -0.75
SMG6-220ENST00000576218 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
SMG6-220ENST00000576218 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
SMG6-220ENST00000576218 A0A087WWC5 75 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 C19orf71A6NCJ1 209 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 MGPP08493 103 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
SMG6-220ENST00000576218 SSBP4Q9BWG4 385 aaPredicted RBP10.38□□□□□ -0.75
SMG6-220ENST00000576218 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 PSCAO43653 123 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 ERVFC1-1P60608 527 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 RAB4BP61018 213 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 CACNG7P62955 275 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 LINC01556Q5JQF7 62 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
SMG6-220ENST00000576218 HECTD4Q9Y4D8 3996 aa10.36□□□□□ -0.75
SMG6-220ENST00000576218 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
SMG6-220ENST00000576218 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
SMG6-220ENST00000576218 TNFRSF18Q9Y5U5 241 aa10.36□□□□□ -0.75
SMG6-220ENST00000576218 F2Z2F3 143 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 NUDT10Q8NFP7 164 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 LYPD6BQ8NI32 183 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 OCC1Q8TAD7 63 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 NUDT11Q96G61 164 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
SMG6-220ENST00000576218 Q9HAA7 133 aa10.35□□□□□ -0.75
SMG6-220ENST00000576218 TRBV7-3A0A075B6L6 115 aa10.34□□□□□ -0.75
SMG6-220ENST00000576218 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
SMG6-220ENST00000576218 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
SMG6-220ENST00000576218 LYZL1Q6UWQ5 148 aa10.34□□□□□ -0.75
SMG6-220ENST00000576218 FAM210AQ96ND0 272 aa10.34□□□□□ -0.75
SMG6-220ENST00000576218 Q9UF83 564 aa10.34□□□□□ -0.75
SMG6-220ENST00000576218 H7C1H1 209 aa10.33□□□□□ -0.76
SMG6-220ENST00000576218 K7EN84 100 aa10.33□□□□□ -0.76
SMG6-220ENST00000576218 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
SMG6-220ENST00000576218 ZNF727A8MUV8 499 aa10.32□□□□□ -0.76
SMG6-220ENST00000576218 UBE2D3P61077 147 aa10.32□□□□□ -0.76
SMG6-220ENST00000576218 UBE2D2P62837 147 aa10.32□□□□□ -0.76
SMG6-220ENST00000576218 TWIST1Q15672 202 aa10.32□□□□□ -0.76
SMG6-220ENST00000576218 A0A087WX48 190 aa10.31□□□□□ -0.76
SMG6-220ENST00000576218 TEX261Q6UWH6 196 aa10.31□□□□□ -0.76
SMG6-220ENST00000576218 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
SMG6-220ENST00000576218 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
SMG6-220ENST00000576218 NEXN-AS1Q8NBZ9 246 aa10.31□□□□□ -0.76
SMG6-220ENST00000576218 BORCS7Q96B45 105 aa10.31□□□□□ -0.76
SMG6-220ENST00000576218 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
SMG6-220ENST00000576218 IBA57-AS1B1ANH7 110 aa10.3□□□□□ -0.76
SMG6-220ENST00000576218 NTF3P20783 257 aa10.3□□□□□ -0.76
SMG6-220ENST00000576218 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
SMG6-220ENST00000576218 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
SMG6-220ENST00000576218 A8MWL6 223 aa10.29□□□□□ -0.76
SMG6-220ENST00000576218 TMEM262E9PQX1 116 aa10.29□□□□□ -0.76
SMG6-220ENST00000576218 SRP19P09132 144 aaKnown RBP10.29□□□□□ -0.76
SMG6-220ENST00000576218 CTRLP40313 264 aa10.29□□□□□ -0.76
SMG6-220ENST00000576218 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
SMG6-220ENST00000576218 LAGE3Q14657 143 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms