RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 TRAV12-3A0A0B4J271 114 aa0.75□□□□□ -2.29
TOM1L1-215ENST00000572905 NPC2P61916 151 aa0.75□□□□□ -2.29
TOM1L1-215ENST00000572905 TCEAL4Q96EI5 215 aa0.75□□□□□ -2.29
TOM1L1-215ENST00000572905 SPEF2Q9C093 1822 aa0.75□□□□□ -2.29
TOM1L1-215ENST00000572905 F2Z2F3 143 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 PITX3O75364 302 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 CCL3L1P16619 93 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 GUCA1AP43080 201 aaPredicted RBP0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 CCDC58Q4VC31 144 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 SLC48A1Q6P1K1 146 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 SMR3AQ99954 134 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 PRDM2Q13029 1718 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 MYH13Q9UKX3 1938 aa0.74□□□□□ -2.29
TOM1L1-215ENST00000572905 SOGA1O94964 1423 aa0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 ZNF142P52746 1687 aaPredicted RBP0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 A6NIN4 97 aa0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 FAM74A4Q5TZK3 123 aa0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 RPL7L1Q6DKI1 246 aaKnown RBP0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 MYH9P35579 1960 aaKnown RBP0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 KIF13AQ9H1H9 1805 aa0.73□□□□□ -2.29
TOM1L1-215ENST00000572905 NCOA3Q9Y6Q9 1424 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 ROCK2O75116 1388 aaKnown RBP0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 EIF4G3O43432 1585 aaKnown RBP0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 BICRAQ9NZM4 1560 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 C9orf116Q5BN46 136 aaPredicted RBP0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 C4orf33Q8N1A6 199 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 C20orf197Q8N268 126 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 COX7B2Q8TF08 81 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 RPRMQ9NS64 109 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 PHLPP1O60346 1717 aa0.72□□□□□ -2.29
TOM1L1-215ENST00000572905 NAV3Q8IVL0 2385 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 TMEM2Q9UHN6 1383 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 ADGRB1O14514 1584 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 AKAP12Q02952 1782 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 RBBP6Q7Z6E9 1792 aaKnown RBP0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 EFCAB10A6NFE3 127 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 IL5P05113 134 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 PIPP12273 146 aaPredicted RBP0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 S100A1P23297 94 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 RPL13AP3Q6NVV1 102 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 KCNRGQ8N5I3 272 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 BPESC1Q9GZL8 116 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 TMEM191AQ9H0A3 160 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 TMEM242Q9NWH2 141 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 NALCNQ8IZF0 1738 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 WDR7Q9Y4E6 1490 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 MYH6P13533 1939 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 ABCA1O95477 2261 aa0.71□□□□□ -2.3
TOM1L1-215ENST00000572905 CUL7Q14999 1698 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 A0A1B0GV90 55 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 FAM25AB3EWG3 89 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 FAM25CB3EWG5 89 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 FAM25GB3EWG6 89 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 WHAMMP3Q1A5X7 153 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 CGREF1Q99674 301 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 PRR15LQ9BU68 103 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 FOCADQ5VW36 1801 aa0.7□□□□□ -2.3
TOM1L1-215ENST00000572905 TANC1Q9C0D5 1861 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 RIMS1Q86UR5 1692 aaKnown RBP0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 A0A087WTM6 91 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 LINC00587B1AMM8 73 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 ATP6V1G2-DDX39BF2Z307 99 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 NDUFA2O43678 99 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 SPTSSAQ969W0 71 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 SDF2Q99470 211 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 TCEAL7Q9BRU2 100 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 CCDC167Q9P0B6 97 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 GNG8Q9UK08 70 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 V9GYV3 84 aa0.69□□□□□ -2.3
TOM1L1-215ENST00000572905 SCRIBQ14160 1630 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 TCHHQ07283 1943 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 MIF4GDA9UHW6 222 aaKnown RBP0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 GNG7O60262 68 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 SNAPC5O75971 98 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 IFNA17P01571 189 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 UBE2G1P62253 170 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 VMO1Q7Z5L0 202 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 SMG6Q86US8 1419 aaKnown RBP0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 ARL11Q969Q4 196 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 C12orf57Q99622 126 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 FAM135AQ9P2D6 1515 aa0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 IBTKQ9P2D0 1353 aaPredicted RBP0.68□□□□□ -2.3
TOM1L1-215ENST00000572905 APCP25054 2843 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 DAPK1P53355 1430 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 PHIPQ8WWQ0 1821 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 FAM92AA1XBS5 289 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 K7EP13 123 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 DLEU1O43261 78 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 SNCGO76070 127 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 NDUFB6O95139 128 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 S100PP25815 95 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 MRPS10P82664 201 aaKnown RBP0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 C1orf54Q8WWF1 131 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 PDCD10Q9BUL8 212 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
TOM1L1-215ENST00000572905 KRTAP2-1Q9BYU5 128 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms