RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 A0A087WWC5 75 aa11.54□□□□□ -0.56
LITAF-211ENST00000572255 PAGE4O60829 102 aa11.54□□□□□ -0.56
LITAF-211ENST00000572255 TPT1P13693 172 aaKnown RBP11.54□□□□□ -0.56
LITAF-211ENST00000572255 ZNF345Q14585 488 aa11.54□□□□□ -0.56
LITAF-211ENST00000572255 Q5VSD8 79 aa11.54□□□□□ -0.56
LITAF-211ENST00000572255 SFRP2Q96HF1 295 aa11.54□□□□□ -0.56
LITAF-211ENST00000572255 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
LITAF-211ENST00000572255 SRRM2Q9UQ35 2752 aaKnown RBP11.53□□□□□ -0.56
LITAF-211ENST00000572255 A0A087WWL8 130 aa11.53□□□□□ -0.56
LITAF-211ENST00000572255 M0R381 172 aa11.53□□□□□ -0.56
LITAF-211ENST00000572255 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
LITAF-211ENST00000572255 FAM213BQ8TBF2 198 aa11.53□□□□□ -0.56
LITAF-211ENST00000572255 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
LITAF-211ENST00000572255 FRZBQ92765 325 aa11.53□□□□□ -0.56
LITAF-211ENST00000572255 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
LITAF-211ENST00000572255 TRAV8-3A0A0A6YYJ7 113 aa11.52□□□□□ -0.57
LITAF-211ENST00000572255 SEC11BP0C7V7 166 aa11.52□□□□□ -0.57
LITAF-211ENST00000572255 ZFP82Q8N141 532 aa11.52□□□□□ -0.57
LITAF-211ENST00000572255 MBD3L1Q8WWY6 194 aa11.52□□□□□ -0.57
LITAF-211ENST00000572255 A0A1B0GV50 99 aa11.51□□□□□ -0.57
LITAF-211ENST00000572255 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
LITAF-211ENST00000572255 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
LITAF-211ENST00000572255 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
LITAF-211ENST00000572255 HAMPP81172 84 aa11.51□□□□□ -0.57
LITAF-211ENST00000572255 WFDC2Q14508 124 aa11.51□□□□□ -0.57
LITAF-211ENST00000572255 TMEM70Q9BUB7 260 aa11.51□□□□□ -0.57
LITAF-211ENST00000572255 HMSDA8MTL9 139 aa11.5□□□□□ -0.57
LITAF-211ENST00000572255 S100A9P06702 114 aaKnown RBP11.5□□□□□ -0.57
LITAF-211ENST00000572255 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
LITAF-211ENST00000572255 ZNF471Q9BX82 626 aaPredicted RBP11.5□□□□□ -0.57
LITAF-211ENST00000572255 VPS13BQ7Z7G8 4022 aa11.5□□□□□ -0.57
LITAF-211ENST00000572255 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
LITAF-211ENST00000572255 BCL2L11O43521 198 aa11.49□□□□□ -0.57
LITAF-211ENST00000572255 A0A0D9SG52 128 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 KANTRA0A1W2PQU2 76 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 LECT2O14960 151 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 PFDN1O60925 122 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 RPL19P84098 196 aaKnown RBP11.48□□□□□ -0.57
LITAF-211ENST00000572255 NIT1Q86X76 327 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
LITAF-211ENST00000572255 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
LITAF-211ENST00000572255 BAGE2Q86Y30 109 aa11.47□□□□□ -0.57
LITAF-211ENST00000572255 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
LITAF-211ENST00000572255 MLST8Q9BVC4 326 aa11.47□□□□□ -0.57
LITAF-211ENST00000572255 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
LITAF-211ENST00000572255 CXCL1P09341 107 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 H2AFB1P0C5Y9 115 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 UBE2D3P61077 147 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 UBE2D2P62837 147 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 OR10AG1Q8NH19 301 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 FAM30AQ9NZY2 134 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 COX11Q9Y6N1 276 aa11.46□□□□□ -0.57
LITAF-211ENST00000572255 TRBV7-3A0A075B6L6 115 aa11.45□□□□□ -0.58
LITAF-211ENST00000572255 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
LITAF-211ENST00000572255 EIF5AP63241 154 aaKnown RBP11.45□□□□□ -0.58
LITAF-211ENST00000572255 RMI2Q96E14 147 aa11.45□□□□□ -0.58
LITAF-211ENST00000572255 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
LITAF-211ENST00000572255 A0A087WX48 190 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 C1QBP02746 253 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 RAB4BP61018 213 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 ZNF56Q15929 161 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 HERC1Q15751 4861 aa11.44□□□□□ -0.58
LITAF-211ENST00000572255 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.43□□□□□ -0.58
LITAF-211ENST00000572255 SNAI2O43623 268 aa11.43□□□□□ -0.58
LITAF-211ENST00000572255 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
LITAF-211ENST00000572255 UBE2WQ96B02 151 aa11.43□□□□□ -0.58
LITAF-211ENST00000572255 CHCHD7Q9BUK0 85 aa11.43□□□□□ -0.58
LITAF-211ENST00000572255 SSBP4Q9BWG4 385 aaPredicted RBP11.43□□□□□ -0.58
LITAF-211ENST00000572255 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
LITAF-211ENST00000572255 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 OR5AL1P0C617 328 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 ELOBQ15370 118 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 KCNIP4Q6PIL6 250 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 NEXN-AS1Q8NBZ9 246 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 DNAH8Q96JB1 4490 aa11.42□□□□□ -0.58
LITAF-211ENST00000572255 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
LITAF-211ENST00000572255 RPL35P42766 123 aaKnown RBP11.41□□□□□ -0.58
LITAF-211ENST00000572255 CCL20P78556 96 aa11.41□□□□□ -0.58
LITAF-211ENST00000572255 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
LITAF-211ENST00000572255 GNG13Q9P2W3 67 aa11.41□□□□□ -0.58
LITAF-211ENST00000572255 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
LITAF-211ENST00000572255 Q6ZSA8 131 aa11.4□□□□□ -0.58
LITAF-211ENST00000572255 C11orf52Q96A22 123 aa11.4□□□□□ -0.58
LITAF-211ENST00000572255 DERL1Q9BUN8 251 aa11.4□□□□□ -0.58
LITAF-211ENST00000572255 TMEM262E9PQX1 116 aa11.39□□□□□ -0.59
LITAF-211ENST00000572255 SSTP61278 116 aa11.39□□□□□ -0.59
LITAF-211ENST00000572255 ATRAIDQ6UW56 229 aa11.39□□□□□ -0.59
LITAF-211ENST00000572255 Q8N976 141 aa11.39□□□□□ -0.59
LITAF-211ENST00000572255 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
LITAF-211ENST00000572255 F5H697 171 aa11.38□□□□□ -0.59
LITAF-211ENST00000572255 Q0VG73 95 aa11.38□□□□□ -0.59
LITAF-211ENST00000572255 LINC01620Q4KN68 170 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms