RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ZNF431	Q8TF32	576 aa	Predicted RBP	0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	IFI27L1	Q96BM0	104 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	AQP10	Q96PS8	301 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	DPY30	Q9C005	99 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	ATG5	Q9H1Y0	275 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	NPVF	Q9HCQ7	196 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	CDC42SE1	Q9NRR8	79 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	SCP2D1	Q9UJQ7	156 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	AP4S1	Q9Y587	144 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	LAMB4	A4D0S4	1761 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	COL4A2	P08572	1712 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	SPHKAP	Q2M3C7	1700 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	ANKRD26	Q9UPS8	1709 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	ARHGAP5	Q13017	1502 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	FN1	P02751	2386 aa	Known RBP	0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	MYLK	Q15746	1914 aa		0.74	□□□□□ -2.29
UBR1-209	ENST00000569243	ADGRL2	O95490	1459 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	GOLGA3	Q08378	1498 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	ANK1	P16157	1881 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	RTEL1-TNFRSF6B	F6WH68	1400 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	PPIP5K1	Q6PFW1	1433 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	C10orf71	Q711Q0	1435 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	SCAPER	Q9BY12	1400 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	MUC22	E2RYF6	1773 aa	Predicted RBP	0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	LAMB2	P55268	1798 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	ESPL1	Q14674	2120 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	ADAMTS7	Q9UKP4	1686 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	CR1	P17927	2039 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	TEX49	A0A1B0GTD5	131 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	CXorf51A	A0A1B0GTR3	108 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	UBE2L5P	A0A1B0GUS4	154 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	TMEM30CP	A0ZSE6	113 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243		A6NIN4	97 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	HCG22	E2RYF7	251 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243		H3BQ15	152 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243		H3BRN7	92 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	CCL16	O15467	120 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	NUPR1	O60356	82 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	DNAL4	O96015	105 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	PPY	P01298	95 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	GNG11	P61952	73 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	UBE2L3	P68036	154 aa	Known RBP	0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	C9orf116	Q5BN46	136 aa	Predicted RBP	0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	FAM74A1	Q5RGS3	127 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	SFTA2	Q6UW10	78 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	PPDPFL	Q8WWR9	84 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	LINC00052	Q96N35	136 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	PMCHL2	Q9BQD1	86 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	REG4	Q9BYZ8	158 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	MRPL35	Q9NZE8	188 aa	Known RBP	0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	ABCA4	P78363	2273 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	KIAA0100	Q14667	2235 aa	Known RBP	0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	GBF1	Q92538	1859 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	PLXNA4	Q9HCM2	1894 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	MAPKBP1	O60336	1514 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	MED14	O60244	1454 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	CCDC18	Q5T9S5	1454 aa		0.73	□□□□□ -2.29
UBR1-209	ENST00000569243	ANKRD36B	Q8N2N9	1353 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	COL4A5	P29400	1685 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	CEP192	Q8TEP8	1941 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	IGKV3-7	A0A075B6H7	116 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	TRAV23DV6	A0A075B6W5	121 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	TRAV13-2	A0A0B4J235	113 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	TRAV12-3	A0A0B4J271	114 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243		H3BRM9	83 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	CCK	P06307	115 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	NMB	P08949	121 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	LINC00032	P0C843	101 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	RNASE3	P12724	160 aa	Known RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	IL9	P15248	144 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	CBLN1	P23435	193 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	FAU	P35544	74 aa	Known RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	DCD	P81605	110 aa	Known RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243		Q0VG73	95 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	C10orf55	Q5SWW7	151 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	C12orf73	Q69YU5	71 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	COMMD6	Q7Z4G1	85 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	DEFB119	Q8N690	84 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	PATE1	Q8WXA2	126 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	ODF3	Q96PU9	254 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	C20orf78	Q9BR46	151 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	TXNDC17	Q9BRA2	123 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	SPANXD	Q9BXN6	97 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	TTTY12	Q9BZ98	90 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	CYSTM1	Q9H1C7	97 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	WFDC10A	Q9H1F0	79 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	MRPL36	Q9P0J6	103 aa	Known RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	ORMDL1	Q9P0S3	153 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	WNK3	Q9BYP7	1800 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	NOTCH1	P46531	2555 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	CHD3	Q12873	2000 aa	Known RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	TEX14	Q8IWB6	1497 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	ARHGAP35	Q9NRY4	1499 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	SHANK2	Q9UPX8	1470 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	ARAP2	Q8WZ64	1704 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	KIAA1551	Q9HCM1	1747 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	SDK1	Q7Z5N4	2213 aa		0.72	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms