RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 UBE2D3P61077 147 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 UBE2D2P62837 147 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 MIAQ16674 131 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 MPV17L2Q567V2 206 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 SDIM1Q6ZPB5 146 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 OR11H4Q8NGC9 324 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
GTF3C1-209ENST00000568569 A0A087WWL8 130 aa7.53□□□□□ -1.2
GTF3C1-209ENST00000568569 TRBV6-8A0A0A6YYG3 113 aa7.53□□□□□ -1.2
GTF3C1-209ENST00000568569 PPP1R1CQ8WVI7 109 aa7.53□□□□□ -1.2
GTF3C1-209ENST00000568569 EPDR1Q9UM22 224 aa7.53□□□□□ -1.2
GTF3C1-209ENST00000568569 FABP5P3A8MUU1 101 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 B4DEV8 164 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 STAG3L2P0CL84 134 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 STAG3L3P0CL85 134 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 PET100P0DJ07 73 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 PKIAP61925 76 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 SFRP2Q96HF1 295 aa7.52□□□□□ -1.21
GTF3C1-209ENST00000568569 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 GCHFRP30047 84 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 RPL12P30050 165 aaKnown RBP7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 IFITM3Q01628 133 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 DNLZQ5SXM8 178 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 MZT2BQ6NZ67 158 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 CLRN3Q8NCR9 226 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 SUN5Q8TC36 379 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 CCDC32Q9BV29 185 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 PHLDA3Q9Y5J5 127 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 ARL2-SNX15V9GYD0 113 aa7.51□□□□□ -1.21
GTF3C1-209ENST00000568569 M0R381 172 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 MPC2O95563 127 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 PTTG1O95997 202 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 H2BFSP57053 126 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 CNBPP62633 177 aaKnown RBP7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 OR10G8Q8NGN5 311 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 CHCHD5Q9BSY4 110 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 WFDC1Q9HC57 220 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 TMEM167BQ9NRX6 74 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 PRR34Q9NV39 138 aa7.5□□□□□ -1.21
GTF3C1-209ENST00000568569 A0A087WYN8 130 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 TRAV34A0A0B4J273 112 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 M0R036 132 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 UPK1BO75841 260 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 TPT1P13693 172 aaKnown RBP7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 CLPSL2Q6UWE3 100 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 RAB24Q969Q5 203 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 DPH3Q96FX2 82 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
GTF3C1-209ENST00000568569 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
GTF3C1-209ENST00000568569 GRIFINA4D1Z8 144 aa7.48□□□□□ -1.21
GTF3C1-209ENST00000568569 SPACA4Q8TDM5 124 aa7.48□□□□□ -1.21
GTF3C1-209ENST00000568569 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
GTF3C1-209ENST00000568569 S100ZQ8WXG8 99 aa7.48□□□□□ -1.21
GTF3C1-209ENST00000568569 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 A0A1W2PRE2 83 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 hDV102S1A0JD36 115 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 PHOX2AO14813 284 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 CXorf1O96002 111 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 CRIP1P50238 77 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 RAB4BP61018 213 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 LINC00299Q6ZSB3 139 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 Q86TA4 180 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 LINC00269Q8N2A0 174 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 ENKURQ8TC29 256 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 BATF3Q9NR55 127 aa7.47□□□□□ -1.21
GTF3C1-209ENST00000568569 SH2D1AO60880 128 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 IFNA7P01567 189 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 RBX1P62877 108 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 ODF1Q14990 250 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 ZNF56Q15929 161 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 TMEM97Q5BJF2 176 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 FAM162BQ5T6X4 162 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.22
GTF3C1-209ENST00000568569 PEX7O00628 323 aa7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 MBP02144 154 aa7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 PRR27Q6MZM9 219 aa7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 WDR73Q6P4I2 378 aa7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 COX8CQ7Z4L0 72 aa7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 PSMG3Q9BT73 122 aaPredicted RBP7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 KIF25-AS1Q9Y6Z4 181 aa7.45□□□□□ -1.22
GTF3C1-209ENST00000568569 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 GAS8-AS1O95177 125 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 GAGE6Q13070 117 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 LINC01559Q495D7 138 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 HIST1H2BAQ96A08 127 aa7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 ACTR3CQ9C0K3 210 aaPredicted RBP7.44□□□□□ -1.22
GTF3C1-209ENST00000568569 ZFP30Q9Y2G7 519 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms