RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TMEM160Q9NX00 188 aa13.4□□□□□ -0.26
SMPD3-211ENST00000568373 ZNF418Q8TF45 676 aaPredicted RBP13.4□□□□□ -0.27
SMPD3-211ENST00000568373 CITED2Q99967 270 aaPredicted RBP13.4□□□□□ -0.27
SMPD3-211ENST00000568373 MAP6D1Q9H9H5 199 aa13.4□□□□□ -0.27
SMPD3-211ENST00000568373 MRPS16Q9Y3D3 137 aaKnown RBP13.4□□□□□ -0.27
SMPD3-211ENST00000568373 PPP1R17O96001 155 aa13.39□□□□□ -0.27
SMPD3-211ENST00000568373 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
SMPD3-211ENST00000568373 HIVEP1P15822 2718 aa13.39□□□□□ -0.27
SMPD3-211ENST00000568373 HILS1P60008 231 aa13.38□□□□□ -0.27
SMPD3-211ENST00000568373 JPT2Q9H910 190 aa13.38□□□□□ -0.27
SMPD3-211ENST00000568373 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
SMPD3-211ENST00000568373 WNK1Q9H4A3 2382 aa13.38□□□□□ -0.27
SMPD3-211ENST00000568373 SYT8Q8NBV8 401 aa13.38□□□□□ -0.27
SMPD3-211ENST00000568373 RBMY1BA6NDE4 496 aaKnown RBP13.37□□□□□ -0.27
SMPD3-211ENST00000568373 RBMY1EA6NEQ0 496 aaKnown RBP13.37□□□□□ -0.27
SMPD3-211ENST00000568373 RBMY1DP0C7P1 496 aaKnown RBP13.37□□□□□ -0.27
SMPD3-211ENST00000568373 RBMY1A1P0DJD3 496 aaKnown RBP13.37□□□□□ -0.27
SMPD3-211ENST00000568373 RBMY1CP0DJD4 496 aa13.37□□□□□ -0.27
SMPD3-211ENST00000568373 RBMY1FQ15415 496 aaKnown RBP13.37□□□□□ -0.27
SMPD3-211ENST00000568373 SMR3AQ99954 134 aa13.37□□□□□ -0.27
SMPD3-211ENST00000568373 ZNF256Q9Y2P7 627 aaPredicted RBP13.37□□□□□ -0.27
SMPD3-211ENST00000568373 HIVEP2P31629 2446 aa13.37□□□□□ -0.27
SMPD3-211ENST00000568373 TRGV11A0A075B6L2 103 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 K7EMI3 77 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 ATP5LO75964 103 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 A0A087WWL8 130 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 NUDT3O95989 172 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 BATFQ16520 125 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 SLC25A34Q6PIV7 304 aa13.36□□□□□ -0.27
SMPD3-211ENST00000568373 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
SMPD3-211ENST00000568373 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
SMPD3-211ENST00000568373 DKK2Q9UBU2 259 aa13.35□□□□□ -0.27
SMPD3-211ENST00000568373 CBY3A6NI87 242 aa13.35□□□□□ -0.27
SMPD3-211ENST00000568373 PRSS1P07477 247 aa13.35□□□□□ -0.27
SMPD3-211ENST00000568373 SUMO4Q6EEV6 95 aa13.35□□□□□ -0.27
SMPD3-211ENST00000568373 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
SMPD3-211ENST00000568373 ODF1Q14990 250 aa13.34□□□□□ -0.27
SMPD3-211ENST00000568373 F5H697 171 aa13.33□□□□□ -0.28
SMPD3-211ENST00000568373 CSTL1Q9H114 145 aa13.33□□□□□ -0.28
SMPD3-211ENST00000568373 NDUFA7O95182 113 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 COX8AP10176 69 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 RPL32P62910 135 aaKnown RBP13.32□□□□□ -0.28
SMPD3-211ENST00000568373 ANKRD39Q53RE8 183 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 FAM74A4Q5TZK3 123 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 CRYGDP07320 174 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 ZNF876PQ49A33 203 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 STPG4Q8N801 248 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 ZMAT4Q9H898 229 aa13.32□□□□□ -0.28
SMPD3-211ENST00000568373 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
SMPD3-211ENST00000568373 COL5A1-AS1Q5SY13 56 aa13.3□□□□□ -0.28
SMPD3-211ENST00000568373 HTN1P15515 57 aa13.3□□□□□ -0.28
SMPD3-211ENST00000568373 CLUHP3Q96NS8 147 aa13.3□□□□□ -0.28
SMPD3-211ENST00000568373 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.29□□□□□ -0.28
SMPD3-211ENST00000568373 LY6G6DO95868 133 aa13.29□□□□□ -0.28
SMPD3-211ENST00000568373 HINT1P49773 126 aaPredicted RBP13.29□□□□□ -0.28
SMPD3-211ENST00000568373 POLR2KP53803 58 aaKnown RBP13.29□□□□□ -0.28
SMPD3-211ENST00000568373 JMJD8Q96S16 334 aa13.29□□□□□ -0.28
SMPD3-211ENST00000568373 PROK1P58294 105 aa13.28□□□□□ -0.28
SMPD3-211ENST00000568373 ZNF56Q15929 161 aa13.28□□□□□ -0.28
SMPD3-211ENST00000568373 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
SMPD3-211ENST00000568373 IGKCP01834 107 aa13.28□□□□□ -0.28
SMPD3-211ENST00000568373 NEGR1Q7Z3B1 354 aa13.28□□□□□ -0.28
SMPD3-211ENST00000568373 M0QY20 66 aa13.27□□□□□ -0.28
SMPD3-211ENST00000568373 DPM2O94777 84 aa13.27□□□□□ -0.28
SMPD3-211ENST00000568373 C2orf66Q6UXQ4 117 aa13.27□□□□□ -0.28
SMPD3-211ENST00000568373 SCGB3A1Q96QR1 104 aa13.27□□□□□ -0.28
SMPD3-211ENST00000568373 HHLA3Q9XRX5 114 aa13.27□□□□□ -0.28
SMPD3-211ENST00000568373 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.29
SMPD3-211ENST00000568373 VCYO14598 125 aa13.27□□□□□ -0.29
SMPD3-211ENST00000568373 INSP01308 110 aa13.27□□□□□ -0.29
SMPD3-211ENST00000568373 FGF6P10767 208 aa13.27□□□□□ -0.29
SMPD3-211ENST00000568373 LINC00467Q9BRT7 94 aa13.27□□□□□ -0.29
SMPD3-211ENST00000568373 MAST4O15021 2626 aa13.26□□□□□ -0.29
SMPD3-211ENST00000568373 A0A087WX48 190 aa13.26□□□□□ -0.29
SMPD3-211ENST00000568373 SDHAF1A6NFY7 115 aa13.26□□□□□ -0.29
SMPD3-211ENST00000568373 OR11H12B2RN74 326 aa13.26□□□□□ -0.29
SMPD3-211ENST00000568373 MRPL35Q9NZE8 188 aaKnown RBP13.26□□□□□ -0.29
SMPD3-211ENST00000568373 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.29
SMPD3-211ENST00000568373 TRBV27A0A0K0K1C4 114 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 PRM2P04554 102 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 ZNF415Q09FC8 603 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 MORN3Q6PF18 240 aaPredicted RBP13.25□□□□□ -0.29
SMPD3-211ENST00000568373 STHQ8IWL8 128 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 TRAV12-1A0A0B4J245 112 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 SAP30O75446 220 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 TCTAP57738 103 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 LINC01587Q99440 93 aa13.25□□□□□ -0.29
SMPD3-211ENST00000568373 M0R2P5 195 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 G0S2P27469 103 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 C2orf91Q6ZV80 131 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 TRPT1Q86TN4 253 aaKnown RBP13.24□□□□□ -0.29
SMPD3-211ENST00000568373 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 F8P00451 2351 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 PIK3CD-AS1Q5SR53 167 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
SMPD3-211ENST00000568373 ERASQ7Z444 233 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms