RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CBY1Q9Y3M2 126 aa12.83□□□□□ -0.36
HERC2-208ENST00000566635 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
HERC2-208ENST00000566635 JPT2Q9H910 190 aa12.82□□□□□ -0.36
HERC2-208ENST00000566635 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
HERC2-208ENST00000566635 NCR2O95944 276 aa12.81□□□□□ -0.36
HERC2-208ENST00000566635 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
HERC2-208ENST00000566635 D6R8Y8 96 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 DLEU1O43261 78 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 LINC00614P0C842 121 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 SMIM15Q7Z3B0 74 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 C18orf32Q8TCD1 76 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
HERC2-208ENST00000566635 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
HERC2-208ENST00000566635 G0S2P27469 103 aa12.79□□□□□ -0.36
HERC2-208ENST00000566635 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
HERC2-208ENST00000566635 ZNF25P17030 456 aaPredicted RBP12.79□□□□□ -0.36
HERC2-208ENST00000566635 LINC00310P59036 64 aa12.79□□□□□ -0.36
HERC2-208ENST00000566635 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
HERC2-208ENST00000566635 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
HERC2-208ENST00000566635 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
HERC2-208ENST00000566635 TRAV26-2A0A0B4J265 109 aa12.78□□□□□ -0.36
HERC2-208ENST00000566635 Q0VG73 95 aa12.78□□□□□ -0.36
HERC2-208ENST00000566635 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
HERC2-208ENST00000566635 A0A087WWL8 130 aa12.77□□□□□ -0.36
HERC2-208ENST00000566635 BAGE3Q86Y29 109 aa12.77□□□□□ -0.36
HERC2-208ENST00000566635 TMEM263Q8WUH6 116 aaKnown RBP12.77□□□□□ -0.36
HERC2-208ENST00000566635 U3KQK5 164 aa12.77□□□□□ -0.36
HERC2-208ENST00000566635 NUPR1O60356 82 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 MGPP08493 103 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 CKS2P33552 79 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 ORMDL3Q8N138 153 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 IL17DQ8TAD2 202 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 SAMD10Q9BYL1 202 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 KIF25-AS1Q9Y6Z4 181 aa12.77□□□□□ -0.37
HERC2-208ENST00000566635 M0R2P5 195 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
HERC2-208ENST00000566635 MRPL16Q9NX20 251 aaKnown RBP12.76□□□□□ -0.37
HERC2-208ENST00000566635 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 SERF1AO75920 110 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 APOC4P55056 127 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 DEFB135Q30KP9 77 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 PRELID3AQ96N28 172 aa12.76□□□□□ -0.37
HERC2-208ENST00000566635 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
HERC2-208ENST00000566635 FAM74A4Q5TZK3 123 aa12.75□□□□□ -0.37
HERC2-208ENST00000566635 NOTCH1P46531 2555 aa12.75□□□□□ -0.37
HERC2-208ENST00000566635 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 NPYP01303 97 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 LINC00315P59091 139 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 ANKRD39Q53RE8 183 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 SMIM17P0DL12 118 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 C16orf74Q96GX8 76 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 SPXQ9BT56 116 aa12.74□□□□□ -0.37
HERC2-208ENST00000566635 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
HERC2-208ENST00000566635 CRYGDP07320 174 aa12.73□□□□□ -0.37
HERC2-208ENST00000566635 URB1-AS1Q96HZ7 61 aa12.73□□□□□ -0.37
HERC2-208ENST00000566635 X6R8D5 127 aa12.73□□□□□ -0.37
HERC2-208ENST00000566635 SCGB1D1O95968 90 aa12.72□□□□□ -0.37
HERC2-208ENST00000566635 NACAE9PAV3 2078 aa12.72□□□□□ -0.37
HERC2-208ENST00000566635 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
HERC2-208ENST00000566635 PPBPP02775 128 aa12.71□□□□□ -0.37
HERC2-208ENST00000566635 PTH2Q96A98 100 aa12.71□□□□□ -0.37
HERC2-208ENST00000566635 MIEN1Q9BRT3 115 aa12.71□□□□□ -0.37
HERC2-208ENST00000566635 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.37
HERC2-208ENST00000566635 LOC389332A0A1B0GUA5 103 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 TNFRSF6BO95407 300 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 NPSP0C0P6 89 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.38
HERC2-208ENST00000566635 TEX43Q6ZNM6 134 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 NRACQ8N912 160 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 MRAP2Q96G30 205 aa12.71□□□□□ -0.38
HERC2-208ENST00000566635 IGHV3-73A0A0B4J1V6 119 aa12.7□□□□□ -0.38
HERC2-208ENST00000566635 PRB2P02812 416 aaPredicted RBP12.7□□□□□ -0.38
HERC2-208ENST00000566635 SUMO4Q6EEV6 95 aa12.7□□□□□ -0.38
HERC2-208ENST00000566635 Q6ZTI0 123 aa12.7□□□□□ -0.38
HERC2-208ENST00000566635 ZNF56Q15929 161 aa12.7□□□□□ -0.38
HERC2-208ENST00000566635 NIT1Q86X76 327 aa12.7□□□□□ -0.38
HERC2-208ENST00000566635 RPL39LQ96EH5 51 aaKnown RBP12.7□□□□□ -0.38
HERC2-208ENST00000566635 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 F5H697 171 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 ESDP10768 282 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 EMP1P54849 157 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 CFAP126Q5VTH2 177 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 RASL10AQ92737 203 aa12.69□□□□□ -0.38
HERC2-208ENST00000566635 A8MWV9 139 aa12.68□□□□□ -0.38
HERC2-208ENST00000566635 DAZ2Q13117 558 aaKnown RBP12.68□□□□□ -0.38
HERC2-208ENST00000566635 A8MZ25 164 aa12.68□□□□□ -0.38
HERC2-208ENST00000566635 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
HERC2-208ENST00000566635 PCP4P48539 62 aa12.68□□□□□ -0.38
HERC2-208ENST00000566635 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
HERC2-208ENST00000566635 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
HERC2-208ENST00000566635 LAMTOR2Q9Y2Q5 125 aa12.67□□□□□ -0.38
HERC2-208ENST00000566635 PMCHP20382 165 aa12.67□□□□□ -0.38
HERC2-208ENST00000566635 MAP1LC3AQ9H492 121 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms