RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 NAGKQ9UJ70 344 aa11.19□□□□□ -0.62
TSR3-202ENST00000566296 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
TSR3-202ENST00000566296 IGLV2-8P01709 118 aa11.18□□□□□ -0.62
TSR3-202ENST00000566296 MGST1P10620 155 aaKnown RBP11.18□□□□□ -0.62
TSR3-202ENST00000566296 GCSHP23434 173 aa11.18□□□□□ -0.62
TSR3-202ENST00000566296 FAM162BQ5T6X4 162 aa11.18□□□□□ -0.62
TSR3-202ENST00000566296 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
TSR3-202ENST00000566296 CRIP1P50238 77 aa11.17□□□□□ -0.62
TSR3-202ENST00000566296 SH2D6Q7Z4S9 175 aa11.17□□□□□ -0.62
TSR3-202ENST00000566296 OR4C5Q8NGB2 326 aa11.17□□□□□ -0.62
TSR3-202ENST00000566296 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
TSR3-202ENST00000566296 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 PSCAO43653 123 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 SH2D1AO60880 128 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 PRR27Q6MZM9 219 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
TSR3-202ENST00000566296 M0R2P5 195 aa11.15□□□□□ -0.62
TSR3-202ENST00000566296 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
TSR3-202ENST00000566296 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
TSR3-202ENST00000566296 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
TSR3-202ENST00000566296 SDF2L1Q9HCN8 221 aa11.14□□□□□ -0.63
TSR3-202ENST00000566296 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 TMEM218A2RU14 115 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 K7EN84 100 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 TIRAPP58753 221 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 LINC01559Q495D7 138 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
TSR3-202ENST00000566296 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 DNAH8Q96JB1 4490 aa11.13□□□□□ -0.63
TSR3-202ENST00000566296 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
TSR3-202ENST00000566296 LOC100131303A0A0U1RQF7 123 aa11.12□□□□□ -0.63
TSR3-202ENST00000566296 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
TSR3-202ENST00000566296 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
TSR3-202ENST00000566296 SMR3BP02814 79 aaPredicted RBP11.12□□□□□ -0.63
TSR3-202ENST00000566296 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
TSR3-202ENST00000566296 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
TSR3-202ENST00000566296 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 IGKV3D-20A0A0C4DH25 116 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 B4DEV8 164 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 KRBOX1C9JBD0 128 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 F8W036 122 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 M0R036 132 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 P01737 135 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 TYMSP04818 313 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 GATA1P15976 413 aaPredicted RBP11.11□□□□□ -0.63
TSR3-202ENST00000566296 RPL23P62829 140 aaKnown RBP11.11□□□□□ -0.63
TSR3-202ENST00000566296 ADIRFQ15847 76 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 LINC01556Q5JQF7 62 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 Q6ZSN1 163 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 SEC11CQ9BY50 192 aa11.11□□□□□ -0.63
TSR3-202ENST00000566296 GNRH2O43555 120 aa11.1□□□□□ -0.63
TSR3-202ENST00000566296 HAMPP81172 84 aa11.1□□□□□ -0.63
TSR3-202ENST00000566296 PNRC1Q12796 327 aaPredicted RBP11.1□□□□□ -0.63
TSR3-202ENST00000566296 OR10J3Q5JRS4 329 aa11.1□□□□□ -0.63
TSR3-202ENST00000566296 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
TSR3-202ENST00000566296 CXCL1P09341 107 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 RPS20P60866 119 aaKnown RBP11.09□□□□□ -0.63
TSR3-202ENST00000566296 RHOHQ15669 191 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 NUDT10Q8NFP7 164 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 ISOC2Q96AB3 205 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 Q9HAA7 133 aa11.09□□□□□ -0.63
TSR3-202ENST00000566296 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 IBA57-AS1B1ANH7 110 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 ADCYAP1P18509 176 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 ASIPP42127 132 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 C15orf54Q8N8G6 183 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 OR2D3Q8NGH3 330 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
TSR3-202ENST00000566296 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
TSR3-202ENST00000566296 TMSB15BA0A087X1C1 80 aa11.07□□□□□ -0.64
TSR3-202ENST00000566296 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
TSR3-202ENST00000566296 GATCO43716 136 aaKnown RBP11.07□□□□□ -0.64
TSR3-202ENST00000566296 CIDEAO60543 219 aa11.07□□□□□ -0.64
TSR3-202ENST00000566296 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
TSR3-202ENST00000566296 RPL19P84098 196 aaKnown RBP11.07□□□□□ -0.64
TSR3-202ENST00000566296 Q8N814 137 aa11.07□□□□□ -0.64
TSR3-202ENST00000566296 SFRP2Q96HF1 295 aa11.07□□□□□ -0.64
TSR3-202ENST00000566296 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
TSR3-202ENST00000566296 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
TSR3-202ENST00000566296 TRBV6-4A0A1B0GX49 114 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 IGHV3-30P01768 117 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 IGHV3-33P01772 117 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 IGHV3-30-3P0DP02 117 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 IGHV3-30-5P0DP03 117 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
TSR3-202ENST00000566296 ZNF876PQ49A33 203 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 CT83Q5H943 113 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 LELP1Q5T871 98 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 SLC7A5P1Q8MH63 180 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 SLC25A29Q8N8R3 303 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms