RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
ABCA3-204ENST00000566200 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
ABCA3-204ENST00000566200 A0A087WWL8 130 aa12.32□□□□□ -0.44
ABCA3-204ENST00000566200 KRTAP29-1A8MX34 341 aaPredicted RBP12.32□□□□□ -0.44
ABCA3-204ENST00000566200 SYT8Q8NBV8 401 aa12.32□□□□□ -0.44
ABCA3-204ENST00000566200 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
ABCA3-204ENST00000566200 SFRP2Q96HF1 295 aa12.32□□□□□ -0.44
ABCA3-204ENST00000566200 KLK12Q9UKR0 248 aa12.32□□□□□ -0.44
ABCA3-204ENST00000566200 COX11Q9Y6N1 276 aa12.32□□□□□ -0.44
ABCA3-204ENST00000566200 LRP1Q07954 4544 aaKnown RBP12.32□□□□□ -0.44
ABCA3-204ENST00000566200 IGKV2D-24A0A075B6R9 120 aa12.31□□□□□ -0.44
ABCA3-204ENST00000566200 GIPP09681 153 aaPredicted RBP12.31□□□□□ -0.44
ABCA3-204ENST00000566200 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
ABCA3-204ENST00000566200 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
ABCA3-204ENST00000566200 ZFP30Q9Y2G7 519 aa12.3□□□□□ -0.44
ABCA3-204ENST00000566200 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
ABCA3-204ENST00000566200 BORCS7-ASMTA0A0B4J1R7 106 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 RBFOX3A6NFN3 312 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 M0R381 172 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 PTTG1O95997 202 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 ZNF674Q2M3X9 581 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 ATRAIDQ6UW56 229 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 Q8N976 141 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 DEFB104AQ8WTQ1 72 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 UBE2WQ96B02 151 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 RMI2Q96E14 147 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 NKX6-2Q9C056 277 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-204ENST00000566200 PHLDA3Q9Y5J5 127 aa12.29□□□□□ -0.44
ABCA3-204ENST00000566200 FAT3Q8TDW7 4589 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 FXYD6-FXYD2A0A087WZ82 144 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 TMSB15BA0A087X1C1 80 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 G3V3Q6 166 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 UBE2D3P61077 147 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 UBE2D2P62837 147 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
ABCA3-204ENST00000566200 CIRBP-AS1Q8TBR5 109 aa12.27□□□□□ -0.45
ABCA3-204ENST00000566200 FMC1Q96HJ9 113 aa12.27□□□□□ -0.45
ABCA3-204ENST00000566200 HMCN2Q8NDA2 5059 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 TRBV6-1A0A0K0K1D8 114 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 LTAP01374 205 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 TPT1P13693 172 aaKnown RBP12.26□□□□□ -0.45
ABCA3-204ENST00000566200 CHCHD7Q9BUK0 85 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
ABCA3-204ENST00000566200 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 A0A087WX48 190 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 UBE2G1P62253 170 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 AKR1C8PQ5T2L2 129 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 ZFP82Q8N141 532 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 CYTL1Q9NRR1 136 aa12.25□□□□□ -0.45
ABCA3-204ENST00000566200 RPL36AP83881 106 aaKnown RBP12.24□□□□□ -0.45
ABCA3-204ENST00000566200 ENHOQ6UWT2 76 aa12.24□□□□□ -0.45
ABCA3-204ENST00000566200 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
ABCA3-204ENST00000566200 RPL36ALQ969Q0 106 aaKnown RBP12.24□□□□□ -0.45
ABCA3-204ENST00000566200 FHITP49789 147 aa12.23□□□□□ -0.45
ABCA3-204ENST00000566200 ELOBQ15370 118 aa12.23□□□□□ -0.45
ABCA3-204ENST00000566200 TRBV6-8A0A0A6YYG3 113 aa12.22□□□□□ -0.45
ABCA3-204ENST00000566200 RPL19P84098 196 aaKnown RBP12.22□□□□□ -0.45
ABCA3-204ENST00000566200 PRR27Q6MZM9 219 aa12.22□□□□□ -0.45
ABCA3-204ENST00000566200 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
ABCA3-204ENST00000566200 Q0VG73 95 aa12.21□□□□□ -0.45
ABCA3-204ENST00000566200 MPV17L2Q567V2 206 aa12.21□□□□□ -0.45
ABCA3-204ENST00000566200 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
ABCA3-204ENST00000566200 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
ABCA3-204ENST00000566200 TCEAL7Q9BRU2 100 aa12.21□□□□□ -0.45
ABCA3-204ENST00000566200 AKR1C3P42330 323 aa12.2□□□□□ -0.46
ABCA3-204ENST00000566200 RAB4BP61018 213 aa12.2□□□□□ -0.46
ABCA3-204ENST00000566200 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
ABCA3-204ENST00000566200 PAGE4O60829 102 aa12.19□□□□□ -0.46
ABCA3-204ENST00000566200 KCNIP4Q6PIL6 250 aa12.19□□□□□ -0.46
ABCA3-204ENST00000566200 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
ABCA3-204ENST00000566200 C1orf43Q9BWL3 253 aa12.19□□□□□ -0.46
ABCA3-204ENST00000566200 ARPC5O15511 151 aa12.18□□□□□ -0.46
ABCA3-204ENST00000566200 IGLV2-8P01709 118 aa12.18□□□□□ -0.46
ABCA3-204ENST00000566200 NTM-AS1Q6ZSK4 140 aa12.18□□□□□ -0.46
ABCA3-204ENST00000566200 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
ABCA3-204ENST00000566200 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
ABCA3-204ENST00000566200 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
ABCA3-204ENST00000566200 SNAI2O43623 268 aa12.17□□□□□ -0.46
ABCA3-204ENST00000566200 CXCL1P09341 107 aa12.17□□□□□ -0.46
ABCA3-204ENST00000566200 ZNF56Q15929 161 aa12.17□□□□□ -0.46
ABCA3-204ENST00000566200 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
ABCA3-204ENST00000566200 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-204ENST00000566200 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
ABCA3-204ENST00000566200 USP17L23D6RBM5 183 aa12.16□□□□□ -0.46
ABCA3-204ENST00000566200 CRPP02741 224 aa12.16□□□□□ -0.46
ABCA3-204ENST00000566200 ANGP03950 147 aaKnown RBP12.16□□□□□ -0.46
ABCA3-204ENST00000566200 C14orf177Q52M58 125 aa12.16□□□□□ -0.46
ABCA3-204ENST00000566200 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
ABCA3-204ENST00000566200 OXTP01178 125 aa12.15□□□□□ -0.46
ABCA3-204ENST00000566200 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
ABCA3-204ENST00000566200 ZNF471Q9BX82 626 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-204ENST00000566200 KIF25-AS1Q9Y6Z4 181 aa12.15□□□□□ -0.46
ABCA3-204ENST00000566200 SMLR1H3BR10 107 aa12.14□□□□□ -0.47
ABCA3-204ENST00000566200 HLA-DQA1P01909 254 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms