RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
CLN6-204ENST00000564752 TRAV1-1A0A0B4J248 108 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 C1QBP02746 253 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 FAM74A4Q5TZK3 123 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 Q6ZSN1 163 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 ZFP82Q8N141 532 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
CLN6-204ENST00000564752 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 SULT1A2P50226 295 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 CCL20P78556 96 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 GAGE1Q13065 139 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 GAGE4Q13068 117 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 GAGE5Q13069 117 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 LELP1Q5T871 98 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 UFSP1Q6NVU6 142 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 Q6ZNX1 250 aa12.43□□□□□ -0.42
CLN6-204ENST00000564752 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
CLN6-204ENST00000564752 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
CLN6-204ENST00000564752 LINC01556Q5JQF7 62 aa12.42□□□□□ -0.42
CLN6-204ENST00000564752 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
CLN6-204ENST00000564752 C11orf52Q96A22 123 aa12.42□□□□□ -0.42
CLN6-204ENST00000564752 SFRP2Q96HF1 295 aa12.42□□□□□ -0.42
CLN6-204ENST00000564752 MLST8Q9BVC4 326 aa12.42□□□□□ -0.42
CLN6-204ENST00000564752 A0A087WWL8 130 aa12.41□□□□□ -0.42
CLN6-204ENST00000564752 LINC00694P0DN24 101 aa12.41□□□□□ -0.42
CLN6-204ENST00000564752 GCSHP23434 173 aa12.41□□□□□ -0.42
CLN6-204ENST00000564752 C14orf178Q8N769 122 aaPredicted RBP12.41□□□□□ -0.42
CLN6-204ENST00000564752 DNAH8Q96JB1 4490 aa12.41□□□□□ -0.42
CLN6-204ENST00000564752 CXCL1P09341 107 aa12.4□□□□□ -0.42
CLN6-204ENST00000564752 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.42
CLN6-204ENST00000564752 AKAP14Q86UN6 197 aa12.4□□□□□ -0.42
CLN6-204ENST00000564752 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
CLN6-204ENST00000564752 hCG_2014768A0A024R1R8 64 aa12.39□□□□□ -0.43
CLN6-204ENST00000564752 LRCOL1A6NCL2 159 aa12.39□□□□□ -0.43
CLN6-204ENST00000564752 IBA57-AS1B1ANH7 110 aa12.39□□□□□ -0.43
CLN6-204ENST00000564752 IFNA1P01562 189 aa12.39□□□□□ -0.43
CLN6-204ENST00000564752 MYCBP2O75592 4640 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 IGHV3-30-3P0DP02 117 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 MEF2BQ02080 365 aaPredicted RBP12.38□□□□□ -0.43
CLN6-204ENST00000564752 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 Q5VSD8 79 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 Q9UF83 564 aa12.38□□□□□ -0.43
CLN6-204ENST00000564752 PSCAO43653 123 aa12.37□□□□□ -0.43
CLN6-204ENST00000564752 OR10AG1Q8NH19 301 aa12.37□□□□□ -0.43
CLN6-204ENST00000564752 FRZBQ92765 325 aa12.37□□□□□ -0.43
CLN6-204ENST00000564752 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
CLN6-204ENST00000564752 A0A087WWC5 75 aa12.36□□□□□ -0.43
CLN6-204ENST00000564752 SNAI2O43623 268 aa12.36□□□□□ -0.43
CLN6-204ENST00000564752 PDE6DO43924 150 aa12.36□□□□□ -0.43
CLN6-204ENST00000564752 Q9HAA7 133 aa12.36□□□□□ -0.43
CLN6-204ENST00000564752 IGLV5-52A0A0A0MRZ9 124 aa12.35□□□□□ -0.43
CLN6-204ENST00000564752 OR5AL1P0C617 328 aa12.35□□□□□ -0.43
CLN6-204ENST00000564752 BCL2P10415 239 aa12.35□□□□□ -0.43
CLN6-204ENST00000564752 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
CLN6-204ENST00000564752 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
CLN6-204ENST00000564752 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
CLN6-204ENST00000564752 SRRM2Q9UQ35 2752 aaKnown RBP12.35□□□□□ -0.43
CLN6-204ENST00000564752 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
CLN6-204ENST00000564752 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
CLN6-204ENST00000564752 GNG4P50150 75 aa12.34□□□□□ -0.43
CLN6-204ENST00000564752 ZNF56Q15929 161 aa12.34□□□□□ -0.43
CLN6-204ENST00000564752 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
CLN6-204ENST00000564752 MUC21A0A0G2JKD1 596 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 MUC21A0A140T8X8 626 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
CLN6-204ENST00000564752 LAGE3Q14657 143 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 Q8N814 137 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
CLN6-204ENST00000564752 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 SSBP4Q9BWG4 385 aaPredicted RBP12.33□□□□□ -0.44
CLN6-204ENST00000564752 MED9Q9NWA0 146 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
CLN6-204ENST00000564752 RAB19A4D1S5 217 aa12.32□□□□□ -0.44
CLN6-204ENST00000564752 IGLV2-8P01709 118 aa12.32□□□□□ -0.44
CLN6-204ENST00000564752 TAGLN2P37802 199 aaKnown RBP12.32□□□□□ -0.44
CLN6-204ENST00000564752 RAB4BP61018 213 aa12.32□□□□□ -0.44
CLN6-204ENST00000564752 Q8N3U1 123 aa12.32□□□□□ -0.44
CLN6-204ENST00000564752 TMEM70Q9BUB7 260 aa12.32□□□□□ -0.44
CLN6-204ENST00000564752 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
CLN6-204ENST00000564752 SSTP61278 116 aa12.31□□□□□ -0.44
CLN6-204ENST00000564752 OR2D3Q8NGH3 330 aa12.31□□□□□ -0.44
CLN6-204ENST00000564752 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
CLN6-204ENST00000564752 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
CLN6-204ENST00000564752 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
CLN6-204ENST00000564752 HAMPP81172 84 aa12.3□□□□□ -0.44
CLN6-204ENST00000564752 BIN3Q9NQY0 253 aa12.3□□□□□ -0.44
CLN6-204ENST00000564752 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
CLN6-204ENST00000564752 TRBV20OR9-2A0A075B6H5 130 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 C19orf71A6NCJ1 209 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 SMIM17P0DL12 118 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 GZMBP10144 247 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 UBE2D3P61077 147 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 UBE2D2P62837 147 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms