RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 RAB14P61106 215 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 Q6ZSN1 163 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 Q86TA4 180 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 SLC51BQ86UW2 128 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 MAP1LC3B2A6NCE7 125 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 GAGE12JA6NER3 117 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 S100A9P06702 114 aaKnown RBP8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 CRIP1P50238 77 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 UBE2G1P62253 170 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 GAGE1Q13065 139 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 GAGE4Q13068 117 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 GAGE5Q13069 117 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 ZNF674Q2M3X9 581 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 GAGE13Q4V321 117 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 MAP1LC3BQ9GZQ8 125 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 Q9HAA7 133 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 CYTL1Q9NRR1 136 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 PHLDA3Q9Y5J5 127 aa8.13□□□□□ -1.11
GTF3C1-204ENST00000564664 LTAP01374 205 aa8.12□□□□□ -1.11
GTF3C1-204ENST00000564664 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
GTF3C1-204ENST00000564664 Q5VSD8 79 aa8.12□□□□□ -1.11
GTF3C1-204ENST00000564664 TMUB2Q71RG4 321 aa8.12□□□□□ -1.11
GTF3C1-204ENST00000564664 KCNRGQ8N5I3 272 aa8.12□□□□□ -1.11
GTF3C1-204ENST00000564664 SFRP2Q96HF1 295 aa8.12□□□□□ -1.11
GTF3C1-204ENST00000564664 TRBV10-1A0A0K0K1A3 114 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 H3BVH4 76 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 SH2D1AO60880 128 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 TPT1P13693 172 aaKnown RBP8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 CST9LP1Q5W188 147 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 ZFP82Q8N141 532 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 RMI2Q96E14 147 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
GTF3C1-204ENST00000564664 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 M0R036 132 aa8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 ARPC5O15511 151 aa8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 ELOBQ15370 118 aa8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 JPT2Q9H910 190 aa8.1□□□□□ -1.11
GTF3C1-204ENST00000564664 GRIFINA4D1Z8 144 aa8.09□□□□□ -1.11
GTF3C1-204ENST00000564664 CXCL1P09341 107 aa8.09□□□□□ -1.11
GTF3C1-204ENST00000564664 AKR1C3P42330 323 aa8.09□□□□□ -1.11
GTF3C1-204ENST00000564664 TRBV7-3A0A075B6L6 115 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 BCL2L11O43521 198 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 KCNIP4Q6PIL6 250 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 DAZ4Q86SG3 579 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 Q8N976 141 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 DAZ3Q9NR90 486 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 Q9UF83 564 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 FAT1Q14517 4588 aa8.08□□□□□ -1.12
GTF3C1-204ENST00000564664 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 A0A087WWL8 130 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 KANTRA0A1W2PQU2 76 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 M0R381 172 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 PAGE4O60829 102 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 SMR3BP02814 79 aaPredicted RBP8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 RAB4BP61018 213 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 EIF5AP63241 154 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 Q0VG73 95 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 NIT1Q86X76 327 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 OR10G8Q8NGN5 311 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 SFT2D1Q8WV19 159 aa8.07□□□□□ -1.12
GTF3C1-204ENST00000564664 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 A0A087WX48 190 aa8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 UBE2D3P61077 147 aa8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 UBE2D2P62837 147 aa8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 BAGE2Q86Y30 109 aa8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 SSBP4Q9BWG4 385 aaPredicted RBP8.06□□□□□ -1.12
GTF3C1-204ENST00000564664 TMSB15BA0A087X1C1 80 aa8.05□□□□□ -1.12
GTF3C1-204ENST00000564664 PKIAP61925 76 aa8.05□□□□□ -1.12
GTF3C1-204ENST00000564664 ATRAIDQ6UW56 229 aa8.05□□□□□ -1.12
GTF3C1-204ENST00000564664 Q6ZSA8 131 aa8.05□□□□□ -1.12
GTF3C1-204ENST00000564664 Q8N3U1 123 aa8.05□□□□□ -1.12
GTF3C1-204ENST00000564664 ZNF471Q9BX82 626 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-204ENST00000564664 OR5AL1P0C617 328 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 TMEM97Q5BJF2 176 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 COMMD7Q86VX2 200 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 FAM213BQ8TBF2 198 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 FAM30AQ9NZY2 134 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 KLK12Q9UKR0 248 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 HERC1Q15751 4861 aa8.04□□□□□ -1.12
GTF3C1-204ENST00000564664 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 RAB19A4D1S5 217 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 SNAI2O43623 268 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 H2AFB1P0C5Y9 115 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 WFDC2Q14508 124 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms