RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 COX8CQ7Z4L0 72 aa11.85□□□□□ -0.51
NME3-205ENST00000563854 IGLV5-52A0A0A0MRZ9 124 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 A0A0D9SG52 128 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 UMAD1C9J7I0 102 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 GCSHP23434 173 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 UFSP1Q6NVU6 142 aa11.84□□□□□ -0.51
NME3-205ENST00000563854 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
NME3-205ENST00000563854 ZFP82Q8N141 532 aa11.83□□□□□ -0.52
NME3-205ENST00000563854 MBD3L1Q8WWY6 194 aa11.83□□□□□ -0.52
NME3-205ENST00000563854 LRCOL1A6NCL2 159 aa11.82□□□□□ -0.52
NME3-205ENST00000563854 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
NME3-205ENST00000563854 H2AFB1P0C5Y9 115 aa11.82□□□□□ -0.52
NME3-205ENST00000563854 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
NME3-205ENST00000563854 SFRP2Q96HF1 295 aa11.82□□□□□ -0.52
NME3-205ENST00000563854 XGP55808 180 aa11.81□□□□□ -0.52
NME3-205ENST00000563854 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
NME3-205ENST00000563854 HAMPP81172 84 aa11.81□□□□□ -0.52
NME3-205ENST00000563854 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
NME3-205ENST00000563854 DAZ4Q86SG3 579 aaKnown RBP11.81□□□□□ -0.52
NME3-205ENST00000563854 DAZ3Q9NR90 486 aaKnown RBP11.81□□□□□ -0.52
NME3-205ENST00000563854 A0A087WWC5 75 aa11.8□□□□□ -0.52
NME3-205ENST00000563854 S100A9P06702 114 aaKnown RBP11.8□□□□□ -0.52
NME3-205ENST00000563854 LAGE3Q14657 143 aa11.8□□□□□ -0.52
NME3-205ENST00000563854 BAGE2Q86Y30 109 aa11.8□□□□□ -0.52
NME3-205ENST00000563854 Q8N814 137 aa11.8□□□□□ -0.52
NME3-205ENST00000563854 TM2D2Q9BX73 214 aa11.8□□□□□ -0.52
NME3-205ENST00000563854 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
NME3-205ENST00000563854 TMUB2Q71RG4 321 aa11.79□□□□□ -0.52
NME3-205ENST00000563854 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 LECT2O14960 151 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 SSTP61278 116 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 ZNF56Q15929 161 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 OR10AG1Q8NH19 301 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 NTN5Q8WTR8 489 aaPredicted RBP11.78□□□□□ -0.52
NME3-205ENST00000563854 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
NME3-205ENST00000563854 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.53
NME3-205ENST00000563854 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
NME3-205ENST00000563854 TOR2AQ5JU69 321 aa11.77□□□□□ -0.53
NME3-205ENST00000563854 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
NME3-205ENST00000563854 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
NME3-205ENST00000563854 WFDC2Q14508 124 aa11.76□□□□□ -0.53
NME3-205ENST00000563854 Q5VSD8 79 aa11.76□□□□□ -0.53
NME3-205ENST00000563854 FRZBQ92765 325 aa11.76□□□□□ -0.53
NME3-205ENST00000563854 TRBV10-1A0A0K0K1A3 114 aa11.75□□□□□ -0.53
NME3-205ENST00000563854 RPL35P42766 123 aaKnown RBP11.75□□□□□ -0.53
NME3-205ENST00000563854 SPANXN1Q5VSR9 72 aa11.75□□□□□ -0.53
NME3-205ENST00000563854 NIT1Q86X76 327 aa11.75□□□□□ -0.53
NME3-205ENST00000563854 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
NME3-205ENST00000563854 MANBALQ9NQG1 85 aa11.75□□□□□ -0.53
NME3-205ENST00000563854 A0A087WX48 190 aa11.74□□□□□ -0.53
NME3-205ENST00000563854 CCL20P78556 96 aa11.74□□□□□ -0.53
NME3-205ENST00000563854 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
NME3-205ENST00000563854 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
NME3-205ENST00000563854 KLK12Q9UKR0 248 aa11.74□□□□□ -0.53
NME3-205ENST00000563854 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.73□□□□□ -0.53
NME3-205ENST00000563854 TRBV7-3A0A075B6L6 115 aa11.73□□□□□ -0.53
NME3-205ENST00000563854 IGKV2D-24A0A075B6R9 120 aa11.73□□□□□ -0.53
NME3-205ENST00000563854 CXCL1P09341 107 aa11.73□□□□□ -0.53
NME3-205ENST00000563854 UBE2D3P61077 147 aa11.73□□□□□ -0.53
NME3-205ENST00000563854 UBE2D2P62837 147 aa11.73□□□□□ -0.53
NME3-205ENST00000563854 DNAJC30Q96LL9 226 aa11.73□□□□□ -0.53
NME3-205ENST00000563854 F5H697 171 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 RAB4BP61018 213 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 CENPWQ5EE01 88 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 RMI2Q96E14 147 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
NME3-205ENST00000563854 TMEM262E9PQX1 116 aa11.71□□□□□ -0.53
NME3-205ENST00000563854 TEX46H3BTG2 121 aa11.71□□□□□ -0.53
NME3-205ENST00000563854 SNAI2O43623 268 aa11.71□□□□□ -0.53
NME3-205ENST00000563854 INAFM2P0DMQ5 153 aa11.71□□□□□ -0.53
NME3-205ENST00000563854 EIF5AL1Q6IS14 154 aaKnown RBP11.71□□□□□ -0.53
NME3-205ENST00000563854 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.53
NME3-205ENST00000563854 TMEM70Q9BUB7 260 aa11.71□□□□□ -0.53
NME3-205ENST00000563854 OR5AL1P0C617 328 aa11.7□□□□□ -0.54
NME3-205ENST00000563854 SMIM17P0DL12 118 aa11.7□□□□□ -0.54
NME3-205ENST00000563854 GZMBP10144 247 aa11.7□□□□□ -0.54
NME3-205ENST00000563854 RAB5CP51148 216 aa11.7□□□□□ -0.54
NME3-205ENST00000563854 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
NME3-205ENST00000563854 ELOBQ15370 118 aa11.69□□□□□ -0.54
NME3-205ENST00000563854 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
NME3-205ENST00000563854 DAZAP1Q96EP5 407 aaKnown RBP11.69□□□□□ -0.54
NME3-205ENST00000563854 AP1S3Q96PC3 154 aa11.69□□□□□ -0.54
NME3-205ENST00000563854 SSBP4Q9BWG4 385 aaPredicted RBP11.69□□□□□ -0.54
NME3-205ENST00000563854 FAM30AQ9NZY2 134 aa11.69□□□□□ -0.54
NME3-205ENST00000563854 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
NME3-205ENST00000563854 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
NME3-205ENST00000563854 TRAV1-1A0A0B4J248 108 aa11.68□□□□□ -0.54
NME3-205ENST00000563854 RAB19A4D1S5 217 aa11.68□□□□□ -0.54
NME3-205ENST00000563854 RBFOX3A6NFN3 312 aa11.68□□□□□ -0.54
NME3-205ENST00000563854 MGPP08493 103 aa11.68□□□□□ -0.54
NME3-205ENST00000563854 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.68□□□□□ -0.54
NME3-205ENST00000563854 OR2D3Q8NGH3 330 aa11.68□□□□□ -0.54
NME3-205ENST00000563854 FAT1Q14517 4588 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms