RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 KCNIP4Q6PIL6 250 aa12.14□□□□□ -0.47
NME3-204ENST00000563498 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
NME3-204ENST00000563498 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
NME3-204ENST00000563498 B4DEV8 164 aa12.13□□□□□ -0.47
NME3-204ENST00000563498 H3BVH4 76 aa12.13□□□□□ -0.47
NME3-204ENST00000563498 ATP6V1G1O75348 118 aa12.13□□□□□ -0.47
NME3-204ENST00000563498 SERF2P84101 59 aa12.13□□□□□ -0.47
NME3-204ENST00000563498 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
NME3-204ENST00000563498 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
NME3-204ENST00000563498 ARMS2P0C7Q2 107 aa12.12□□□□□ -0.47
NME3-204ENST00000563498 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
NME3-204ENST00000563498 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
NME3-204ENST00000563498 TRAV34A0A0B4J273 112 aa12.11□□□□□ -0.47
NME3-204ENST00000563498 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
NME3-204ENST00000563498 ATP6V0CP27449 155 aa12.11□□□□□ -0.47
NME3-204ENST00000563498 RPL37AP61513 92 aaKnown RBP12.11□□□□□ -0.47
NME3-204ENST00000563498 SFRP2Q96HF1 295 aa12.11□□□□□ -0.47
NME3-204ENST00000563498 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
NME3-204ENST00000563498 ACTR3CQ9C0K3 210 aaPredicted RBP12.11□□□□□ -0.47
NME3-204ENST00000563498 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
NME3-204ENST00000563498 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
NME3-204ENST00000563498 COX8CQ7Z4L0 72 aa12.1□□□□□ -0.47
NME3-204ENST00000563498 Q86TA4 180 aa12.1□□□□□ -0.47
NME3-204ENST00000563498 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
NME3-204ENST00000563498 A0A087WWL8 130 aa12.09□□□□□ -0.47
NME3-204ENST00000563498 UBE2D3P61077 147 aa12.09□□□□□ -0.47
NME3-204ENST00000563498 UBE2D2P62837 147 aa12.09□□□□□ -0.47
NME3-204ENST00000563498 PHLDA3Q9Y5J5 127 aa12.09□□□□□ -0.47
NME3-204ENST00000563498 PKHD1L1Q86WI1 4243 aa12.08□□□□□ -0.48
NME3-204ENST00000563498 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
NME3-204ENST00000563498 IFNA7P01567 189 aa12.08□□□□□ -0.48
NME3-204ENST00000563498 CRIP1P50238 77 aa12.08□□□□□ -0.48
NME3-204ENST00000563498 ENHOQ6UWT2 76 aa12.08□□□□□ -0.48
NME3-204ENST00000563498 AQP10Q96PS8 301 aa12.08□□□□□ -0.48
NME3-204ENST00000563498 M0R036 132 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 PEX7O00628 323 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 CRPP02741 224 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 HIST1H2BAQ96A08 127 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 ZC2HC1AQ96GY0 325 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 NKX6-2Q9C056 277 aaPredicted RBP12.07□□□□□ -0.48
NME3-204ENST00000563498 ZFP30Q9Y2G7 519 aa12.07□□□□□ -0.48
NME3-204ENST00000563498 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 GRIFINA4D1Z8 144 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 SH2D1AO60880 128 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 TPT1P13693 172 aaKnown RBP12.06□□□□□ -0.48
NME3-204ENST00000563498 DEFA1P59665 94 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 DEFA3P59666 94 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 FAM162BQ5T6X4 162 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 ZFP82Q8N141 532 aa12.06□□□□□ -0.48
NME3-204ENST00000563498 DAZAP1Q96EP5 407 aaKnown RBP12.06□□□□□ -0.48
NME3-204ENST00000563498 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
NME3-204ENST00000563498 M0R381 172 aa12.05□□□□□ -0.48
NME3-204ENST00000563498 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
NME3-204ENST00000563498 DGAT2L7PQ6IED9 249 aa12.05□□□□□ -0.48
NME3-204ENST00000563498 USP17L23D6RBM5 183 aa12.04□□□□□ -0.48
NME3-204ENST00000563498 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
NME3-204ENST00000563498 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
NME3-204ENST00000563498 FAM74A7A6NL05 159 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 UBE2G2P60604 165 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 PKIAP61925 76 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 MIAQ16674 131 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 ZNF674Q2M3X9 581 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 C9orf163Q8N9P6 203 aa12.03□□□□□ -0.48
NME3-204ENST00000563498 CTXND1A0A1B0GTU2 59 aa12.02□□□□□ -0.49
NME3-204ENST00000563498 ANGP03950 147 aaKnown RBP12.02□□□□□ -0.49
NME3-204ENST00000563498 PRSS1P07477 247 aa12.02□□□□□ -0.49
NME3-204ENST00000563498 RAB4BP61018 213 aa12.02□□□□□ -0.49
NME3-204ENST00000563498 ZNF726P1Q15940 193 aa12.02□□□□□ -0.49
NME3-204ENST00000563498 Q6ZNX1 250 aa12.02□□□□□ -0.49
NME3-204ENST00000563498 FMC1Q96HJ9 113 aa12.02□□□□□ -0.49
NME3-204ENST00000563498 HLA-DQA1P01909 254 aa12.01□□□□□ -0.49
NME3-204ENST00000563498 TMSB15BA0A087X1C1 80 aa12□□□□□ -0.49
NME3-204ENST00000563498 TRBV6-1A0A0K0K1D8 114 aa12□□□□□ -0.49
NME3-204ENST00000563498 UBE2G1P62253 170 aa12□□□□□ -0.49
NME3-204ENST00000563498 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
NME3-204ENST00000563498 PRR27Q6MZM9 219 aa12□□□□□ -0.49
NME3-204ENST00000563498 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
NME3-204ENST00000563498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
NME3-204ENST00000563498 PTTG1O95997 202 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 LTAP01374 205 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 MT1HL1P0DM35 61 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 NEXN-AS1Q8NBZ9 246 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 TCEAL7Q9BRU2 100 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
NME3-204ENST00000563498 TMEM97Q5BJF2 176 aa11.98□□□□□ -0.49
NME3-204ENST00000563498 RPL7L1Q6DKI1 246 aaKnown RBP11.98□□□□□ -0.49
NME3-204ENST00000563498 Q6ZRU5 148 aa11.98□□□□□ -0.49
NME3-204ENST00000563498 ALG5Q9Y673 324 aa11.98□□□□□ -0.49
NME3-204ENST00000563498 BORCS7-ASMTA0A0B4J1R7 106 aa11.97□□□□□ -0.49
NME3-204ENST00000563498 ZNF56Q15929 161 aa11.97□□□□□ -0.49
NME3-204ENST00000563498 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
NME3-204ENST00000563498 A0A0D9SG52 128 aa11.96□□□□□ -0.49
NME3-204ENST00000563498 PANO1I0J062 215 aa11.96□□□□□ -0.49
NME3-204ENST00000563498 FHITP49789 147 aa11.96□□□□□ -0.49
NME3-204ENST00000563498 KRTAP26-1Q6PEX3 210 aa11.96□□□□□ -0.49
NME3-204ENST00000563498 INO80EQ8NBZ0 244 aaPredicted RBP11.96□□□□□ -0.49
NME3-204ENST00000563498 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms