RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TRAV12-1A0A0B4J245 112 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 CBY3A6NI87 242 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 FGF6P10767 208 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 BOD1L2Q8IYS8 172 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 SCGB3A1Q96QR1 104 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 ITPR3Q14573 2671 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 ZNF25P17030 456 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 MPV17L2Q567V2 206 aa15.75■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 MUC4Q99102 2169 aa15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 CCL24O00175 119 aa15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 VCYO14598 125 aa15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 SIVA1O15304 175 aa15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 CD28P10747 220 aa15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 CD300EQ496F6 205 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 TSSC4Q9Y5U2 329 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 TRBV6-5A0A0K0K1A5 114 aa15.73■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 ZNF418Q8TF45 676 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 TMEM160Q9NX00 188 aa15.73■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 PLNP26678 52 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 POLR2KP53803 58 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 C2orf66Q6UXQ4 117 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 C2orf91Q6ZV80 131 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 HHLA3Q9XRX5 114 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 ZNF876PQ49A33 203 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 BVES-AS1Q5T3Y7 98 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 FAM74A4Q5TZK3 123 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 CLUHP3Q96NS8 147 aa15.72■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 A0A1W2PRX2 142 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 RBMY1BA6NDE4 496 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 RBMY1EA6NEQ0 496 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 H7C1H1 209 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 CRYGDP07320 174 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 RBMY1DP0C7P1 496 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 NMUP48645 174 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 ZNF56Q15929 161 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 LINC01006Q8NI28 216 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 KIR2DL4Q99706 377 aa15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 MRPL35Q9NZE8 188 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 ZNF256Q9Y2P7 627 aaPredicted RBP15.71■□□□□ 0.11
VPS9D1-AS1-202ENST00000562866 RBMY1A1P0DJD3 496 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 RBMY1CP0DJD4 496 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 GAGE1Q13065 139 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 RBMY1FQ15415 496 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 LINC00467Q9BRT7 94 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 FASNP49327 2511 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 ERASQ7Z444 233 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 TRPT1Q86TN4 253 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 C11orf44Q8N8P7 122 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 CITED2Q99967 270 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 TMEM208Q9BTX3 173 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 CYSLTR1Q9Y271 337 aa15.7■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 JMJD8Q96S16 334 aa15.69■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 GCN1Q92616 2671 aaKnown RBP15.69■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 TRBV27A0A0K0K1C4 114 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 SDHAF1A6NFY7 115 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 F8VRH5 84 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 M0QY20 66 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 ZNF415Q09FC8 603 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 ZNF124Q15973 351 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 PIK3CD-AS1Q5SR53 167 aa15.68■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 HILS1P60008 231 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 ZC2HC1BQ5TFG8 222 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 HIST2H2BDQ6DRA6 164 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 NEXN-AS1Q8NBZ9 246 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 ORAOV1Q8WV07 137 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 PTH2Q96A98 100 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 CHTOPQ9Y3Y2 248 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 INSP01308 110 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 ZFP2Q6ZN57 461 aa15.67■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 NBPF19A0A087WUL8 3843 aa15.66■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 TMEM97Q5BJF2 176 aa15.66■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 NEGR1Q7Z3B1 354 aa15.66■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 M0R2P5 195 aa15.65■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 NDUFA7O95182 113 aa15.65■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 CMC4P56277 68 aaPredicted RBP15.65■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 TCTAP57738 103 aa15.65■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 PCP2Q8IVA1 136 aa15.65■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 COX11Q9Y6N1 276 aa15.65■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 HTN1P15515 57 aa15.64■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 RIPPLY3P57055 190 aa15.64■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 GTSCR1Q86UQ5 136 aa15.64■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 BAALCQ8WXS3 180 aa15.64■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 EDA2RQ9HAV5 297 aa15.64■□□□□ 0.1
VPS9D1-AS1-202ENST00000562866 AGRNO00468 2067 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 A8MWV9 139 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 SEC11AP67812 179 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 HSD52Q0P140 79 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 RHOHQ15669 191 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 ODF3L2Q3SX64 289 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 TMEM141Q96I45 108 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 LINC01587Q99440 93 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 PDZD2O15018 2839 aa15.64■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 OR11H12B2RN74 326 aa15.63■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 STHQ8IWL8 128 aa15.63■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 TP53TG1Q9Y2A0 90 aa15.63■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 MORN3Q6PF18 240 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 SPXQ9BT56 116 aa15.62■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 HIGD1BQ9P298 99 aa15.62■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 FLNAP21333 2647 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 IGKV2D-26A0A0A0MRZ7 120 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms