RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 UFSP1Q6NVU6 142 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 Q86TA4 180 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 AQP10Q96PS8 301 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 ALG5Q9Y673 324 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 TMSB15BA0A087X1C1 80 aa8.52□□□□□ -1.05
SF3B3-202ENST00000562722 M0R381 172 aa8.52□□□□□ -1.05
SF3B3-202ENST00000562722 TPT1P13693 172 aaKnown RBP8.52□□□□□ -1.05
SF3B3-202ENST00000562722 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
SF3B3-202ENST00000562722 BORCS7-ASMTA0A0B4J1R7 106 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 RNF222A6NCQ9 220 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 KRBOX1C9JBD0 128 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 SH2D1AO60880 128 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 FAM162BQ5T6X4 162 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 INO80EQ8NBZ0 244 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-202ENST00000562722 ZC2HC1AQ96GY0 325 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
SF3B3-202ENST00000562722 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 UBE2G1P62253 170 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 RPL36AP83881 106 aaKnown RBP8.5□□□□□ -1.05
SF3B3-202ENST00000562722 RPL7L1Q6DKI1 246 aaKnown RBP8.5□□□□□ -1.05
SF3B3-202ENST00000562722 ZFP82Q8N141 532 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 RPL36ALQ969Q0 106 aaKnown RBP8.5□□□□□ -1.05
SF3B3-202ENST00000562722 HIST1H2BAQ96A08 127 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 SFRP2Q96HF1 295 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 CHCHD7Q9BUK0 85 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 MED28Q9H204 178 aa8.5□□□□□ -1.05
SF3B3-202ENST00000562722 FAM74A7A6NL05 159 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 CRPP02741 224 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 CRIP1P50238 77 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 Q0VG73 95 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 ZNF726P1Q15940 193 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 C14orf177Q52M58 125 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 NKX6-2Q9C056 277 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-202ENST00000562722 ZFP30Q9Y2G7 519 aa8.49□□□□□ -1.05
SF3B3-202ENST00000562722 FXYD6-FXYD2A0A087WZ82 144 aa8.48□□□□□ -1.05
SF3B3-202ENST00000562722 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
SF3B3-202ENST00000562722 DNLZQ5SXM8 178 aa8.48□□□□□ -1.05
SF3B3-202ENST00000562722 AKR1C8PQ5T2L2 129 aa8.48□□□□□ -1.05
SF3B3-202ENST00000562722 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
SF3B3-202ENST00000562722 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 IGLV2-8P01709 118 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 UBE2D3P61077 147 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 UBE2D2P62837 147 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 ZNF56Q15929 161 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 Q5BKY6 102 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 C15orf54Q8N8G6 183 aa8.47□□□□□ -1.05
SF3B3-202ENST00000562722 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-202ENST00000562722 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
SF3B3-202ENST00000562722 A6NHS1 94 aa8.46□□□□□ -1.06
SF3B3-202ENST00000562722 OXTP01178 125 aa8.46□□□□□ -1.06
SF3B3-202ENST00000562722 HLA-DQA1P01909 254 aa8.46□□□□□ -1.06
SF3B3-202ENST00000562722 ANGP03950 147 aaKnown RBP8.46□□□□□ -1.06
SF3B3-202ENST00000562722 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
SF3B3-202ENST00000562722 CST9LP1Q5W188 147 aa8.46□□□□□ -1.06
SF3B3-202ENST00000562722 FAT3Q8TDW7 4589 aa8.46□□□□□ -1.06
SF3B3-202ENST00000562722 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 MAP1LC3B2A6NCE7 125 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 GIPP09681 153 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-202ENST00000562722 AKR1C3P42330 323 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-202ENST00000562722 RPL37AP61513 92 aaKnown RBP8.45□□□□□ -1.06
SF3B3-202ENST00000562722 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 ATRAIDQ6UW56 229 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 STOML3Q8TAV4 291 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 CHCHD5Q9BSY4 110 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 MAP1LC3BQ9GZQ8 125 aa8.45□□□□□ -1.06
SF3B3-202ENST00000562722 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 PTTG1O95997 202 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 LTAP01374 205 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 RAB4BP61018 213 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 MPV17L2Q567V2 206 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 ENHOQ6UWT2 76 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 COX8CQ7Z4L0 72 aa8.44□□□□□ -1.06
SF3B3-202ENST00000562722 F5H697 171 aa8.43□□□□□ -1.06
SF3B3-202ENST00000562722 PKIAP61925 76 aa8.43□□□□□ -1.06
SF3B3-202ENST00000562722 OR10G8Q8NGN5 311 aa8.43□□□□□ -1.06
SF3B3-202ENST00000562722 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
SF3B3-202ENST00000562722 PLA2G2DQ9UNK4 145 aa8.43□□□□□ -1.06
SF3B3-202ENST00000562722 MUC21A0A0G2JKD1 596 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 TRBV6-1A0A0K0K1D8 114 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 MUC21A0A140T8X8 626 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 SSTP61278 116 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 RPL19P84098 196 aaKnown RBP8.42□□□□□ -1.06
SF3B3-202ENST00000562722 SPANXN1Q5VSR9 72 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 CLPSL2Q6UWE3 100 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 OR10AG1Q8NH19 301 aa8.42□□□□□ -1.06
SF3B3-202ENST00000562722 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-202ENST00000562722 FHITP49789 147 aa8.41□□□□□ -1.06
SF3B3-202ENST00000562722 MIAQ16674 131 aa8.41□□□□□ -1.06
SF3B3-202ENST00000562722 PAGE4O60829 102 aa8.4□□□□□ -1.06
SF3B3-202ENST00000562722 PRSS1P07477 247 aa8.4□□□□□ -1.06
SF3B3-202ENST00000562722 SMIM17P0DL12 118 aa8.4□□□□□ -1.06
SF3B3-202ENST00000562722 A0A1B0GV50 99 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms